RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 TRPM8Q7Z2W7 1104 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 LINC00346Q8IVM7 164 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 C1orf174Q8IYL3 243 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 ADGRG5Q8IZF4 528 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 LINC00471Q8N535 108 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 CYB561A3Q8NBI2 242 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 AQP11Q8NBQ7 271 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 OR52E2Q8NGJ4 325 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 SPATA3Q8NHX4 192 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 BCAS4Q8TDM0 211 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 ZNRF4Q8WWF5 429 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 MSL2Q9HCI7 577 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 IL20Q9NYY1 176 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 POLR1DQ9Y2S0 133 aa12.26□□□□□ -0.45
HMGN3-202ENST00000344726 FBN3Q75N90 2809 aa12.25□□□□□ -0.45
HMGN3-202ENST00000344726 RNF212BA8MTL3 300 aa12.25□□□□□ -0.45
HMGN3-202ENST00000344726 PPIHO43447 177 aaKnown RBP12.25□□□□□ -0.45
HMGN3-202ENST00000344726 ADH4P08319 380 aa12.25□□□□□ -0.45
HMGN3-202ENST00000344726 SRD5A1P18405 259 aa12.25□□□□□ -0.45
HMGN3-202ENST00000344726 RBMXP38159 391 aaKnown RBP12.25□□□□□ -0.45
HMGN3-202ENST00000344726 TEKQ02763 1124 aa12.25□□□□□ -0.45
HMGN3-202ENST00000344726 COX10Q12887 443 aa12.25□□□□□ -0.45
HMGN3-202ENST00000344726 MICAQ29983 383 aa12.25□□□□□ -0.45
HMGN3-202ENST00000344726 FAM98BQ52LJ0 330 aaKnown RBP12.25□□□□□ -0.45
HMGN3-202ENST00000344726 PGM2L1Q6PCE3 622 aa12.25□□□□□ -0.45
HMGN3-202ENST00000344726 ARL9Q6T311 187 aa12.25□□□□□ -0.45
HMGN3-202ENST00000344726 CFAP77Q6ZQR2 320 aa12.25□□□□□ -0.45
HMGN3-202ENST00000344726 Q6ZR03 302 aa12.25□□□□□ -0.45
HMGN3-202ENST00000344726 LINC01356Q8N9X3 169 aa12.25□□□□□ -0.45
HMGN3-202ENST00000344726 OR52L1Q8NGH7 329 aa12.25□□□□□ -0.45
HMGN3-202ENST00000344726 SLC7A6OSQ96CW6 309 aaPredicted RBP12.25□□□□□ -0.45
HMGN3-202ENST00000344726 REEP1Q9H902 201 aa12.25□□□□□ -0.45
HMGN3-202ENST00000344726 SAP30LQ9HAJ7 183 aa12.25□□□□□ -0.45
HMGN3-202ENST00000344726 DECR2Q9NUI1 292 aa12.25□□□□□ -0.45
HMGN3-202ENST00000344726 MRPL22Q9NWU5 206 aaKnown RBP12.25□□□□□ -0.45
HMGN3-202ENST00000344726 ATPIF1Q9UII2 106 aa12.25□□□□□ -0.45
HMGN3-202ENST00000344726 SAMHD1Q9Y3Z3 626 aaKnown RBP12.25□□□□□ -0.45
HMGN3-202ENST00000344726 ANK2Q01484 3957 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 IGHV1-69-2A0A0G2JMI3 117 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 PLSCR5A0PG75 271 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 TPD52L2O43399 206 aaKnown RBP12.24□□□□□ -0.45
HMGN3-202ENST00000344726 SOX14O95416 240 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 MT-ND5P03915 603 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 RAP2AP10114 183 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 PSKH1P11801 424 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 PYCR1P32322 319 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 GGT2P36268 569 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 LMO4P61968 165 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 TRAP1Q12931 704 aaKnown RBP12.24□□□□□ -0.45
HMGN3-202ENST00000344726 KRTAP24-1Q3LI83 254 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 FAM209AQ5JX71 171 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 AVPI1Q5T686 147 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 SLC18B1Q6NT16 456 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 RPL13AP3Q6NVV1 102 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 LYPD4Q6UWN0 246 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 TMEM179BQ7Z7N9 219 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 GJC3Q8NFK1 279 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 OR4Q3Q8NH05 313 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 CANT1Q8WVQ1 401 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 CMBLQ96DG6 245 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 LRGUKQ96M69 825 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 COQ7Q99807 217 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 NIPSNAP1Q9BPW8 284 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 CHID1Q9BWS9 393 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 DGCR6LQ9BY27 220 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 TBC1D23Q9NUY8 699 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 TREM2Q9NZC2 230 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 CYB5R1Q9UHQ9 305 aa12.24□□□□□ -0.45
HMGN3-202ENST00000344726 PURGQ9UJV8 347 aaKnown RBP12.24□□□□□ -0.45
HMGN3-202ENST00000344726 TIMM8AO60220 97 aaPredicted RBP12.23□□□□□ -0.45
HMGN3-202ENST00000344726 GSTM3P21266 225 aa12.23□□□□□ -0.45
HMGN3-202ENST00000344726 KITLGP21583 273 aa12.23□□□□□ -0.45
HMGN3-202ENST00000344726 RPS27P42677 84 aaKnown RBP12.23□□□□□ -0.45
HMGN3-202ENST00000344726 MVKQ03426 396 aa12.23□□□□□ -0.45
HMGN3-202ENST00000344726 HLXQ14774 488 aaPredicted RBP12.23□□□□□ -0.45
HMGN3-202ENST00000344726 KRTAP27-1Q3LI81 207 aa12.23□□□□□ -0.45
HMGN3-202ENST00000344726 LNX2Q8N448 690 aa12.23□□□□□ -0.45
HMGN3-202ENST00000344726 SLC37A3Q8NCC5 494 aa12.23□□□□□ -0.45
HMGN3-202ENST00000344726 OR10G2Q8NGC3 310 aa12.23□□□□□ -0.45
HMGN3-202ENST00000344726 OR9Q1Q8NGQ5 310 aa12.23□□□□□ -0.45
HMGN3-202ENST00000344726 HAVCR1Q96D42 359 aa12.23□□□□□ -0.45
HMGN3-202ENST00000344726 MAP6Q96JE9 813 aa12.23□□□□□ -0.45
HMGN3-202ENST00000344726 TSSK6Q9BXA6 273 aa12.23□□□□□ -0.45
HMGN3-202ENST00000344726 HDHD2Q9H0R4 259 aa12.23□□□□□ -0.45
HMGN3-202ENST00000344726 LPAR2Q9HBW0 351 aa12.23□□□□□ -0.45
HMGN3-202ENST00000344726 PNRC2Q9NPJ4 139 aaKnown RBP12.23□□□□□ -0.45
HMGN3-202ENST00000344726 CYSLTR2Q9NS75 346 aa12.23□□□□□ -0.45
HMGN3-202ENST00000344726 ARMC1Q9NVT9 282 aa12.23□□□□□ -0.45
HMGN3-202ENST00000344726 CGGBP1Q9UFW8 167 aaPredicted RBP12.23□□□□□ -0.45
HMGN3-202ENST00000344726 DOCK11Q5JSL3 2073 aa12.23□□□□□ -0.45
HMGN3-202ENST00000344726 TVP23AA6NH52 213 aa12.22□□□□□ -0.45
HMGN3-202ENST00000344726 AQP12BA6NM10 295 aa12.22□□□□□ -0.45
HMGN3-202ENST00000344726 CST1P01037 141 aa12.22□□□□□ -0.45
HMGN3-202ENST00000344726 HLA-DQA2P01906 255 aa12.22□□□□□ -0.45
HMGN3-202ENST00000344726 CD55P08174 381 aa12.22□□□□□ -0.45
HMGN3-202ENST00000344726 TUBG1P23258 451 aa12.22□□□□□ -0.45
HMGN3-202ENST00000344726 THBS2P35442 1172 aa12.22□□□□□ -0.45
HMGN3-202ENST00000344726 LIPAP38571 399 aa12.22□□□□□ -0.45
HMGN3-202ENST00000344726 CDK5R2Q13319 367 aa12.22□□□□□ -0.45
HMGN3-202ENST00000344726 CRMP1Q14194 572 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms