RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 ITGA3P26006 1051 aa16.51■□□□□ 0.23
HOXA9-201ENST00000343483 GZMKP49863 264 aa16.51■□□□□ 0.23
HOXA9-201ENST00000343483 B3GALT5-AS1P59052 145 aa16.51■□□□□ 0.23
HOXA9-201ENST00000343483 FAPQ12884 760 aa16.51■□□□□ 0.23
HOXA9-201ENST00000343483 RAB40AQ8WXH6 277 aa16.51■□□□□ 0.23
HOXA9-201ENST00000343483 THRSPQ92748 146 aa16.51■□□□□ 0.23
HOXA9-201ENST00000343483 SCMH1Q96GD3 660 aa16.51■□□□□ 0.23
HOXA9-201ENST00000343483 NAA11Q9BSU3 229 aaPredicted RBP16.51■□□□□ 0.23
HOXA9-201ENST00000343483 NIPAL2Q9H841 368 aa16.51■□□□□ 0.23
HOXA9-201ENST00000343483 FOXJ3Q9UPW0 622 aa16.51■□□□□ 0.23
HOXA9-201ENST00000343483 C7orf66A4D0T2 115 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 SRSF10O75494 262 aaKnown RBP16.5■□□□□ 0.23
HOXA9-201ENST00000343483 ART1P52961 327 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 DCAF10Q5QP82 559 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 TMEM69Q5SWH9 247 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 ABHD17BQ5VST6 288 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 JMJD6Q6NYC1 403 aaPredicted RBP16.5■□□□□ 0.23
HOXA9-201ENST00000343483 SLC25A47Q6Q0C1 308 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 DEGS2Q6QHC5 323 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 C1orf198Q9H425 327 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 PLEKHA1Q9HB21 404 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 MRPL15Q9P015 296 aaKnown RBP16.5■□□□□ 0.23
HOXA9-201ENST00000343483 OR52A1Q9UKL2 312 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 ETV7Q9Y603 341 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 SPAARA0A1B0GVQ0 90 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 SMLR1H3BR10 107 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 GABARAPH6UMI1 98 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 ENPP1P22413 925 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 CD96P40200 585 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 ID4P47928 161 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 FCN2Q15485 313 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 HIST3H3Q16695 136 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 CREB3L2Q70SY1 520 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 IL22RA1Q8N6P7 574 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 OR52I2Q8NH67 350 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 HAVCR1Q96D42 359 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 SFXN2Q96NB2 322 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 ZNF385AQ96PM9 386 aaKnown RBP16.5■□□□□ 0.23
HOXA9-201ENST00000343483 SRXN1Q9BYN0 137 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 GHITMQ9H3K2 345 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 LHFPL6Q9Y693 200 aa16.5■□□□□ 0.23
HOXA9-201ENST00000343483 PINLYPA6NC86 204 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 SULT1B1O43704 296 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 KRT33AO76009 404 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 VAMP5O95183 116 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 GDF1P27539 372 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 PTH2RP49190 550 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 Q5BKY6 102 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 WIPI1Q5MNZ9 446 aaPredicted RBP16.49■□□□□ 0.23
HOXA9-201ENST00000343483 CFAP77Q6ZQR2 320 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 PIP4P1Q86T03 277 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 OR9K2Q8NGE7 335 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 OR6N1Q8NGY5 312 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 OR2AJ1Q8NGZ0 328 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 ZFAND1Q8TCF1 268 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 ADAMTS17Q8TE56 1095 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 FCAMRQ8WWV6 532 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 SLA2Q9H6Q3 261 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 G6PC2Q9NQR9 355 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 GDF2Q9UK05 429 aaPredicted RBP16.49■□□□□ 0.23
HOXA9-201ENST00000343483 RCE1Q9Y256 329 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 WDPCPO95876 746 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 H2AFB2P0C5Z0 115 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 CDK2P24941 298 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 STOMP27105 288 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 CASRP41180 1078 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 CSNK1A1P48729 337 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 KLHL24Q6TFL4 600 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 BTN2A1Q7KYR7 527 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 OR10S1Q8NGN2 331 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 KCNE4Q8WWG9 221 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 ASB5Q8WWX0 329 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 PHF21AQ96BD5 680 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 ZFP64Q9NPA5 681 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 GLTPQ9NZD2 209 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 ASH2LQ9UBL3 628 aa16.49■□□□□ 0.23
HOXA9-201ENST00000343483 CELSR3Q9NYQ7 3312 aa16.48■□□□□ 0.23
HOXA9-201ENST00000343483 FRYQ5TBA9 3013 aa16.48■□□□□ 0.23
HOXA9-201ENST00000343483 LOC107986453A0A1B0GWG9 222 aa16.48■□□□□ 0.23
HOXA9-201ENST00000343483 ECDO95905 644 aaPredicted RBP16.48■□□□□ 0.23
HOXA9-201ENST00000343483 CD2P06729 351 aa16.48■□□□□ 0.23
HOXA9-201ENST00000343483 CNR1P21554 472 aa16.48■□□□□ 0.23
HOXA9-201ENST00000343483 NOVA1P51513 510 aaKnown RBP16.48■□□□□ 0.23
HOXA9-201ENST00000343483 OR13C3Q8NGS6 347 aa16.48■□□□□ 0.23
HOXA9-201ENST00000343483 SIGLEC12Q96PQ1 595 aa16.48■□□□□ 0.23
HOXA9-201ENST00000343483 OR2M2Q96R28 347 aa16.48■□□□□ 0.23
HOXA9-201ENST00000343483 OR51J1Q9H342 316 aa16.48■□□□□ 0.23
HOXA9-201ENST00000343483 ABI3Q9P2A4 366 aa16.48■□□□□ 0.23
HOXA9-201ENST00000343483 CKLFQ9UBR5 152 aa16.48■□□□□ 0.23
HOXA9-201ENST00000343483 STEAP1Q9UHE8 339 aa16.48■□□□□ 0.23
HOXA9-201ENST00000343483 HHLA2Q9UM44 414 aa16.48■□□□□ 0.23
HOXA9-201ENST00000343483 A6NL46 340 aa16.47■□□□□ 0.23
HOXA9-201ENST00000343483 NR2C1P13056 603 aa16.47■□□□□ 0.23
HOXA9-201ENST00000343483 STARP49675 285 aa16.47■□□□□ 0.23
HOXA9-201ENST00000343483 AP3S2P59780 193 aa16.47■□□□□ 0.23
HOXA9-201ENST00000343483 TNK1Q13470 666 aa16.47■□□□□ 0.23
HOXA9-201ENST00000343483 LINC00696Q6ZRV3 163 aa16.47■□□□□ 0.23
HOXA9-201ENST00000343483 UTP23Q9BRU9 249 aaKnown RBP16.47■□□□□ 0.23
HOXA9-201ENST00000343483 TRAF4Q9BUZ4 470 aaPredicted RBP16.47■□□□□ 0.23
HOXA9-201ENST00000343483 HRASLSQ9HDD0 168 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms