RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 LRFN5Q96NI6 719 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 GPR78Q96P69 363 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 M0QZ24 198 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 CSN1S1P47710 185 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 HCCSP53701 268 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 SUMO3P55854 103 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-202ENST00000342494 SLC25A21Q9BQT8 299 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-202ENST00000342494 RPP25Q9BUL9 199 aaKnown RBP13.63□□□□□ -0.23
UBE3B-202ENST00000342494 JAM3Q9BX67 310 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 PLK3Q9H4B4 646 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 PPP1R3CQ9UQK1 317 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 MYH4Q9Y623 1939 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 TRBV5-4A0A0C4DH59 114 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 IMPA2O14732 288 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 TSPAN12O95859 305 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 NME2P22392 152 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 PPT1P50897 306 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 FZD2Q14332 565 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 CA5BP1Q8WTZ4 195 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 SLC23A1Q9UHI7 598 aa13.63□□□□□ -0.23
UBE3B-202ENST00000342494 PUS1Q9Y606 427 aaKnown RBP eCLIP13.63□□□□□ -0.23
UBE3B-202ENST00000342494 KNL1Q8NG31 2342 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 DVL1O14640 695 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 DFFBO76075 338 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 DVL1P1P54792 670 aaPredicted RBP13.62□□□□□ -0.23
UBE3B-202ENST00000342494 BATFQ16520 125 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 FAM199XQ6PEV8 388 aaPredicted RBP13.62□□□□□ -0.23
UBE3B-202ENST00000342494 CREB3L2Q70SY1 520 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 CDC20BQ86Y33 519 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 ZNF75AQ96N20 296 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 SARGQ9BW04 601 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 PLA2G2FQ9BZM2 168 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 OR2W5A6NFC9 320 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 CLEC2LP0C7M8 214 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 PPP3CBP16298 524 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 HTR4Q13639 388 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 MPPED2Q15777 294 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 ALKBH6Q3KRA9 238 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 BTLAQ7Z6A9 289 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 NRARPQ7Z6K4 114 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 TMEM99Q8N816 258 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 C15orf54Q8N8G6 183 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 OR2AK2Q8NG84 335 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 RBFOX1Q9NWB1 397 aaKnown RBP13.62□□□□□ -0.23
UBE3B-202ENST00000342494 KIF13AQ9H1H9 1805 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 HOXD11P31277 338 aaPredicted RBP13.62□□□□□ -0.23
UBE3B-202ENST00000342494 ARRB2P32121 409 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 DIO1P49895 249 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 EMDP50402 254 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 PCK2Q16822 640 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 NT5CQ8TCD5 201 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 HINT3Q9NQE9 182 aaKnown RBP13.62□□□□□ -0.23
UBE3B-202ENST00000342494 POM121CA8CG34 1229 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 TRAF3IP2O43734 574 aaPredicted RBP13.62□□□□□ -0.23
UBE3B-202ENST00000342494 RAF1P04049 648 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 CRYBA1P05813 215 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 OR2B11Q5JQS5 317 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 OR1J1Q8NGS3 322 aa13.62□□□□□ -0.23
UBE3B-202ENST00000342494 LINC01387J3KSC0 135 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 WIPI1Q5MNZ9 446 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-202ENST00000342494 CYHR1Q6ZMK1 362 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 CMTM4Q8IZR5 234 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 ACOT8O14734 319 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 PMS2P2O95744 297 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 THNSL2Q86YJ6 484 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 OLIG1Q8TAK6 271 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 ALKBH3Q96Q83 286 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-202ENST00000342494 ASB1Q9Y576 335 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 FAM90A27PA6NNH2 459 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 TCRBP04435 133 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 HAAOP46952 286 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 CEACAM16Q2WEN9 425 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 COMMD5Q9GZQ3 224 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 KCNG2Q9UJ96 466 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 ANKUB1A6NFN9 424 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 SLC2A10O95528 541 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 TMEM200AQ86VY9 491 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 ADGRF3Q8IZF5 1079 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 SLC38A9Q8NBW4 561 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 CDX2Q99626 313 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-202ENST00000342494 A3GALT2U3KPV4 340 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 FZD6O60353 706 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 ALKAL2Q6UX46 152 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 MZB1Q8WU39 189 aa13.61□□□□□ -0.23
UBE3B-202ENST00000342494 TINAGL1Q9GZM7 467 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-202ENST00000342494 TRABD2BA6NFA1 517 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 IL9P15248 144 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 TNFRSF1AP19438 455 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 ALOX5APP20292 161 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 TFF2Q03403 129 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 CCDC71Q8IV32 467 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-202ENST00000342494 BCL2L10Q9HD36 194 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 FBXL4Q9UKA2 621 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 RPS10-NUDT3A0A1W2PQS6 291 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 TMEM129A0AVI4 362 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 SH2D7A6NKC9 451 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-202ENST00000342494 CNR1P21554 472 aa13.6□□□□□ -0.23
UBE3B-202ENST00000342494 NKX2-1P43699 371 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-202ENST00000342494 RPS10P46783 165 aaKnown RBP13.6□□□□□ -0.23
UBE3B-202ENST00000342494 SSTP61278 116 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms