RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 CTSFQ9UBX1 484 aa20.06■□□□□ 0.8
TRIM28-202ENST00000341753 LRP12Q9Y561 859 aa20.06■□□□□ 0.8
TRIM28-202ENST00000341753 ZNF705EA8MWA4 302 aaPredicted RBP20.05■□□□□ 0.8
TRIM28-202ENST00000341753 CRYBA1P05813 215 aa20.05■□□□□ 0.8
TRIM28-202ENST00000341753 HRH1P35367 487 aa20.05■□□□□ 0.8
TRIM28-202ENST00000341753 OR4K17Q8NGC6 315 aa20.05■□□□□ 0.8
TRIM28-202ENST00000341753 MITD1Q8WV92 249 aa20.05■□□□□ 0.8
TRIM28-202ENST00000341753 RRNAD1Q96FB5 475 aaKnown RBP20.05■□□□□ 0.8
TRIM28-202ENST00000341753 GLAP06280 429 aa20.05■□□□□ 0.8
TRIM28-202ENST00000341753 CTLA4P16410 223 aa20.05■□□□□ 0.8
TRIM28-202ENST00000341753 SERPINF1P36955 418 aa20.05■□□□□ 0.8
TRIM28-202ENST00000341753 RFC3P40938 356 aa20.05■□□□□ 0.8
TRIM28-202ENST00000341753 BIKQ13323 160 aa20.05■□□□□ 0.8
TRIM28-202ENST00000341753 EMC4Q5J8M3 183 aa20.05■□□□□ 0.8
TRIM28-202ENST00000341753 NKAPLQ5M9Q1 402 aa20.05■□□□□ 0.8
TRIM28-202ENST00000341753 ZNF813Q6ZN06 617 aa20.05■□□□□ 0.8
TRIM28-202ENST00000341753 Q6ZS52 159 aa20.05■□□□□ 0.8
TRIM28-202ENST00000341753 TMEM200AQ86VY9 491 aa20.05■□□□□ 0.8
TRIM28-202ENST00000341753 LIPHQ8WWY8 451 aa20.05■□□□□ 0.8
TRIM28-202ENST00000341753 ABHD6Q9BV23 337 aa20.05■□□□□ 0.8
TRIM28-202ENST00000341753 CHMP1AQ9HD42 196 aaPredicted RBP20.05■□□□□ 0.8
TRIM28-202ENST00000341753 CLDN16Q9Y5I7 305 aa20.05■□□□□ 0.8
TRIM28-202ENST00000341753 SCDO00767 359 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 KIF26BQ2KJY2 2108 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 CYP8B1Q9UNU6 501 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 ARID1AO14497 2285 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 PHYHO14832 338 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 ZNF264O43296 627 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 HOXC4P09017 264 aaPredicted RBP20.04■□□□□ 0.8
TRIM28-202ENST00000341753 RNH1P13489 461 aaKnown RBP20.04■□□□□ 0.8
TRIM28-202ENST00000341753 INSM1Q01101 510 aaPredicted RBP20.04■□□□□ 0.8
TRIM28-202ENST00000341753 ACKR1Q16570 336 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 AKIRIN2Q53H80 203 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 TEX30Q5JUR7 227 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 RXFP4Q8TDU9 374 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 CNTNAP3BQ96NU0 1288 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 ZNF587Q96SQ5 575 aaPredicted RBP20.04■□□□□ 0.8
TRIM28-202ENST00000341753 FN3KRPQ9HA64 309 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 BIN3Q9NQY0 253 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 FREM3P0C091 2139 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 SOX1O00570 391 aaPredicted RBP20.04■□□□□ 0.8
TRIM28-202ENST00000341753 FGF16O43320 207 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 SEMA4FO95754 770 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 NUDT14O95848 222 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 AKT2P31751 481 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 RIDAP52758 137 aaKnown RBP20.04■□□□□ 0.8
TRIM28-202ENST00000341753 AIMP2Q13155 320 aaKnown RBP20.04■□□□□ 0.8
TRIM28-202ENST00000341753 FNDC7Q5VTL7 733 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 DHRS7BQ6IAN0 325 aaPredicted RBP20.04■□□□□ 0.8
TRIM28-202ENST00000341753 FDX2Q6P4F2 183 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 DEFB119Q8N690 84 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 ZSCAN1Q8NBB4 408 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 ARL11Q969Q4 196 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 ADOQ96SZ5 270 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 PRRT1Q99946 306 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 HRH4Q9H3N8 390 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 UBQLN4Q9NRR5 601 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 CYB5R1Q9UHQ9 305 aa20.04■□□□□ 0.8
TRIM28-202ENST00000341753 CDC14CA4D256 554 aa20.03■□□□□ 0.8
TRIM28-202ENST00000341753 PMP2P02689 132 aa20.03■□□□□ 0.8
TRIM28-202ENST00000341753 IGFBP3P17936 291 aaPredicted RBP20.03■□□□□ 0.8
TRIM28-202ENST00000341753 LTBRP36941 435 aa20.03■□□□□ 0.8
TRIM28-202ENST00000341753 CATSPERDQ86XM0 798 aa20.03■□□□□ 0.8
TRIM28-202ENST00000341753 ZNF440Q8IYI8 595 aa20.03■□□□□ 0.8
TRIM28-202ENST00000341753 KDM8Q8N371 416 aa20.03■□□□□ 0.8
TRIM28-202ENST00000341753 ZNF615Q8N8J6 731 aa20.03■□□□□ 0.8
TRIM28-202ENST00000341753 RLN3Q8WXF3 142 aa20.03■□□□□ 0.8
TRIM28-202ENST00000341753 OR2S2Q9NQN1 319 aa20.03■□□□□ 0.8
TRIM28-202ENST00000341753 GDF2Q9UK05 429 aaPredicted RBP20.03■□□□□ 0.8
TRIM28-202ENST00000341753 LOC107986453A0A1B0GWG9 222 aa20.03■□□□□ 0.8
TRIM28-202ENST00000341753 UTS2O95399 124 aa20.03■□□□□ 0.8
TRIM28-202ENST00000341753 GUSBP08236 651 aa20.03■□□□□ 0.8
TRIM28-202ENST00000341753 GNB3P16520 340 aa20.03■□□□□ 0.8
TRIM28-202ENST00000341753 PSMB6P28072 239 aa20.03■□□□□ 0.8
TRIM28-202ENST00000341753 MEOX2P50222 304 aa20.03■□□□□ 0.8
TRIM28-202ENST00000341753 PDZK1IP1Q13113 114 aa20.03■□□□□ 0.8
TRIM28-202ENST00000341753 PAQR4Q8N4S7 273 aaPredicted RBP20.03■□□□□ 0.8
TRIM28-202ENST00000341753 C8orf44Q96CB5 159 aa20.03■□□□□ 0.8
TRIM28-202ENST00000341753 SLCO5A1Q9H2Y9 848 aa20.03■□□□□ 0.8
TRIM28-202ENST00000341753 SLC22A11Q9NSA0 550 aa20.03■□□□□ 0.8
TRIM28-202ENST00000341753 PRSS37A4D1T9 235 aa20.02■□□□□ 0.8
TRIM28-202ENST00000341753 MSGN1A6NI15 193 aa20.02■□□□□ 0.8
TRIM28-202ENST00000341753 LDLRAD4O15165 306 aa20.02■□□□□ 0.8
TRIM28-202ENST00000341753 IGHV4-34P06331 123 aa20.02■□□□□ 0.8
TRIM28-202ENST00000341753 CRHP06850 196 aa20.02■□□□□ 0.8
TRIM28-202ENST00000341753 IFI6P09912 130 aa20.02■□□□□ 0.8
TRIM28-202ENST00000341753 TPT1P13693 172 aaKnown RBP20.02■□□□□ 0.8
TRIM28-202ENST00000341753 PPICP45877 212 aa20.02■□□□□ 0.8
TRIM28-202ENST00000341753 GPR85P60893 370 aa20.02■□□□□ 0.8
TRIM28-202ENST00000341753 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.02■□□□□ 0.8
TRIM28-202ENST00000341753 LINC00346Q8IVM7 164 aa20.02■□□□□ 0.8
TRIM28-202ENST00000341753 BAP18Q8IXM2 172 aa20.02■□□□□ 0.8
TRIM28-202ENST00000341753 MARCH1Q8TCQ1 289 aa20.02■□□□□ 0.8
TRIM28-202ENST00000341753 NXF5Q9H1B4 397 aaKnown RBP20.02■□□□□ 0.8
TRIM28-202ENST00000341753 HCRTR2O43614 444 aa20.02■□□□□ 0.79
TRIM28-202ENST00000341753 ZP2Q05996 745 aa20.02■□□□□ 0.79
TRIM28-202ENST00000341753 MEF2DQ14814 521 aa20.02■□□□□ 0.79
TRIM28-202ENST00000341753 TOMM20Q15388 145 aa20.02■□□□□ 0.79
TRIM28-202ENST00000341753 ZSCAN4Q8NAM6 433 aaPredicted RBP20.02■□□□□ 0.79
TRIM28-202ENST00000341753 CRB3Q9BUF7 120 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms