RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 ADGRE4PQ86SQ3 457 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 OR10H5Q8NGA6 315 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 OR1S2Q8NGQ3 325 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 CNTD2Q9H8S5 307 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 PHF3Q92576 2039 aaKnown RBP12.9□□□□□ -0.34
CPSF7-201ENST00000340437 PCDH15Q96QU1 1955 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 A0A1B0GW55 424 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 HTR3BO95264 441 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 HPP00738 406 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 DUX4L2P0CJ85 424 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 DUX4L3P0CJ86 424 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 DUX4L4P0CJ87 422 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 DUX4L5P0CJ88 424 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 DUX4L6P0CJ89 424 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 DUX4L7P0CJ90 424 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 CD96P40200 585 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 DCUN1D4Q92564 292 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 AIFM2Q9BRQ8 373 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 COPS7AQ9UBW8 275 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 DUX4Q9UBX2 424 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 DENND4AQ7Z401 1863 aa12.9□□□□□ -0.34
CPSF7-201ENST00000340437 NBASA2RRP1 2371 aa12.9□□□□□ -0.35
CPSF7-201ENST00000340437 IGKV1D-43A0A0B4J1Z2 117 aa12.9□□□□□ -0.35
CPSF7-201ENST00000340437 CPED1A4D0V7 1026 aa12.9□□□□□ -0.35
CPSF7-201ENST00000340437 PHYHO14832 338 aa12.9□□□□□ -0.35
CPSF7-201ENST00000340437 AGPAT2O15120 278 aa12.9□□□□□ -0.35
CPSF7-201ENST00000340437 STK17BO94768 372 aa12.9□□□□□ -0.35
CPSF7-201ENST00000340437 CLPSP04118 112 aa12.9□□□□□ -0.35
CPSF7-201ENST00000340437 CTRB1P17538 263 aa12.9□□□□□ -0.35
CPSF7-201ENST00000340437 AWAT2Q6E213 333 aa12.9□□□□□ -0.35
CPSF7-201ENST00000340437 CTRB2Q6GPI1 263 aa12.9□□□□□ -0.35
CPSF7-201ENST00000340437 TMEM200AQ86VY9 491 aa12.9□□□□□ -0.35
CPSF7-201ENST00000340437 ZSCAN1Q8NBB4 408 aa12.9□□□□□ -0.35
CPSF7-201ENST00000340437 OR13C8Q8NGS7 320 aa12.9□□□□□ -0.35
CPSF7-201ENST00000340437 OR2I1PQ8NGU4 316 aa12.9□□□□□ -0.35
CPSF7-201ENST00000340437 OR6K3Q8NGY3 331 aa12.9□□□□□ -0.35
CPSF7-201ENST00000340437 MARCH1Q8TCQ1 289 aa12.9□□□□□ -0.35
CPSF7-201ENST00000340437 RPS4Y2Q8TD47 263 aa12.9□□□□□ -0.35
CPSF7-201ENST00000340437 SLC46A1Q96NT5 459 aa12.9□□□□□ -0.35
CPSF7-201ENST00000340437 GPER1Q99527 375 aa12.9□□□□□ -0.35
CPSF7-201ENST00000340437 DUSP15Q9H1R2 295 aaPredicted RBP12.9□□□□□ -0.35
CPSF7-201ENST00000340437 ELL3Q9HB65 397 aaPredicted RBP12.9□□□□□ -0.35
CPSF7-201ENST00000340437 TREM1Q9NP99 234 aa12.9□□□□□ -0.35
CPSF7-201ENST00000340437 TUBAL3A6NHL2 446 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 RHPN2P1A8MT19 583 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 METTL12A8MUP2 240 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 MPIG6BO95866 241 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 ITGB2P05107 769 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 NPY4RP50391 375 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 EMC4Q5J8M3 183 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 C11orf87Q6NUJ2 197 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 OR52N5Q8NH56 324 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 HOXB13Q92826 284 aaPredicted RBP12.89□□□□□ -0.35
CPSF7-201ENST00000340437 FAM71F1Q96KD3 344 aaPredicted RBP12.89□□□□□ -0.35
CPSF7-201ENST00000340437 PCDHB16Q9NRJ7 776 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 SYT7O43581 403 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 AGTR1P30556 359 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 ELOCQ15369 112 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 TMPPEQ6ZT21 453 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 SLC29A4Q7RTT9 530 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 OVCH2Q7RTZ1 564 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 NAXDQ8IW45 347 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 C9orf40Q8IXQ3 194 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 NAXEQ8NCW5 288 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 LAT2Q9GZY6 243 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 SLC6A15Q9H2J7 730 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 SPTA1P02549 2419 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 PGAM2P15259 253 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 RPA2P15927 270 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 MGMTP16455 207 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 BLKP51451 505 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 NICN1Q9BSH3 213 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 TXNIPQ9H3M7 391 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 PCDHB10Q9UN67 800 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 LHX6Q9UPM6 363 aa12.89□□□□□ -0.35
CPSF7-201ENST00000340437 FAM221BA6H8Z2 402 aa12.88□□□□□ -0.35
CPSF7-201ENST00000340437 POU2F2P09086 479 aa12.88□□□□□ -0.35
CPSF7-201ENST00000340437 UBBP0CG47 229 aa12.88□□□□□ -0.35
CPSF7-201ENST00000340437 UBCP0CG48 685 aaKnown RBP12.88□□□□□ -0.35
CPSF7-201ENST00000340437 ABCD3P28288 659 aa12.88□□□□□ -0.35
CPSF7-201ENST00000340437 CAPZBP47756 277 aa12.88□□□□□ -0.35
CPSF7-201ENST00000340437 OR1D5P58170 312 aa12.88□□□□□ -0.35
CPSF7-201ENST00000340437 RPS27AP62979 156 aaKnown RBP12.88□□□□□ -0.35
CPSF7-201ENST00000340437 UBA52P62987 128 aaKnown RBP12.88□□□□□ -0.35
CPSF7-201ENST00000340437 CCINQ13939 588 aa12.88□□□□□ -0.35
CPSF7-201ENST00000340437 CLVS2Q5SYC1 327 aa12.88□□□□□ -0.35
CPSF7-201ENST00000340437 FNDC7Q5VTL7 733 aa12.88□□□□□ -0.35
CPSF7-201ENST00000340437 KLHL24Q6TFL4 600 aa12.88□□□□□ -0.35
CPSF7-201ENST00000340437 TMED6Q8WW62 240 aa12.88□□□□□ -0.35
CPSF7-201ENST00000340437 ASB17Q8WXJ9 295 aa12.88□□□□□ -0.35
CPSF7-201ENST00000340437 SLC25A21Q9BQT8 299 aaPredicted RBP12.88□□□□□ -0.35
CPSF7-201ENST00000340437 UTP23Q9BRU9 249 aaKnown RBP12.88□□□□□ -0.35
CPSF7-201ENST00000340437 SOX7Q9BT81 388 aa12.88□□□□□ -0.35
CPSF7-201ENST00000340437 PRMT8Q9NR22 394 aaPredicted RBP12.88□□□□□ -0.35
CPSF7-201ENST00000340437 HS3ST3A1Q9Y663 406 aa12.88□□□□□ -0.35
CPSF7-201ENST00000340437 OR6C65A6NJZ3 312 aa12.88□□□□□ -0.35
CPSF7-201ENST00000340437 CSRP1P21291 193 aaKnown RBP12.88□□□□□ -0.35
CPSF7-201ENST00000340437 CDAP32320 146 aa12.88□□□□□ -0.35
CPSF7-201ENST00000340437 NUP54Q7Z3B4 507 aa12.88□□□□□ -0.35
CPSF7-201ENST00000340437 ANGPTL5Q86XS5 388 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms