RNA–Protein interactions for RNA: ENST00000338585.6

MCF2-201, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-201ENST00000338585 CEP78Q5JTW2 689 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 RIPPLY2Q5TAB7 128 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 ASPHD2Q6ICH7 369 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 DEGS2Q6QHC5 323 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 EGFL6Q8IUX8 553 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 LAX1Q8IWV1 398 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 SKA3Q8IX90 412 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 SLC22A24Q8N4F4 322 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 APH1AQ96BI3 265 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 GFI1Q99684 422 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 NKX3-1Q99801 234 aaPredicted RBP3.63□□□□□ -1.83
MCF2-201ENST00000338585 ATF6BQ99941 703 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 SLC30A2Q9BRI3 323 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 SOX7Q9BT81 388 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 COMMD4Q9H0A8 199 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 MIXL1Q9H2W2 232 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 RNF122Q9H9V4 155 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 SIAEQ9HAT2 523 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 ZNF319Q9P2F9 582 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 OR52A1Q9UKL2 312 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 AK6Q9Y3D8 172 aaKnown RBP3.63□□□□□ -1.83
MCF2-201ENST00000338585 PIEZO2Q9H5I5 2752 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 A0A075B6Q4 140 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 A0A096LPE4 126 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 IQCMA0A1B0GVH7 501 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 LOC107986453A0A1B0GWG9 222 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 A0A1W2PPZ6 126 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 ZNF503-AS2A6NEH8 195 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 A6NIN4 97 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 HSPB2A8KAH6 182 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 CLDN25C9JDP6 229 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 F5H5K5 113 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 ZNF32P17041 273 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 ADRA2CP18825 462 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 MYL9P24844 172 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 HSD11B1P28845 292 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 TNFSF8P32971 234 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 THBS2P35442 1172 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 CX3CR1P49238 355 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 MMP16P51512 607 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 TMPRSS3P57727 454 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 ZNF121P58317 390 aaPredicted RBP3.63□□□□□ -1.83
MCF2-201ENST00000338585 PSMA6P60900 246 aaKnown RBP3.63□□□□□ -1.83
MCF2-201ENST00000338585 HIST1H3AP68431 136 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 TAF13Q15543 124 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 HSPB2Q16082 182 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 Q499Y3 187 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 HSD17B12Q53GQ0 312 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 SFRP5Q5T4F7 317 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 IDNKQ5T6J7 187 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 BCL2L15Q5TBC7 163 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 HIST2H3PS2Q5TEC6 136 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 ZNF774Q6NX45 483 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 ZNF585AQ6P3V2 769 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 ZNF813Q6ZN06 617 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 HIST2H3AQ71DI3 136 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 P4HA3Q7Z4N8 544 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 ZNF100Q8IYN0 542 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 UBE2J2Q8N2K1 259 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 TEX19Q8NA77 164 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 Q8NA96 180 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 C9orf106Q8NAJ2 232 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 DNAAF1Q8NEP3 725 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 AKR7LQ8NHP1 331 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 HAVCR2Q8TDQ0 301 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 GPR148Q8TDV2 347 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 TSEN15Q8WW01 171 aaKnown RBP3.63□□□□□ -1.83
MCF2-201ENST00000338585 TMEM106AQ96A25 262 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 SARAFQ96BY9 339 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 LINC00470Q9BZP3 86 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 PBOV1Q9GZY1 135 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 ABCB9Q9NP78 766 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 DDX28Q9NUL7 540 aaKnown RBP3.63□□□□□ -1.83
MCF2-201ENST00000338585 PARPBPQ9NWS1 579 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 PLEK2Q9NYT0 353 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 ZNF224Q9NZL3 707 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 COMMD3Q9UBI1 195 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 DAPK2Q9UIK4 370 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 ZNF175Q9Y473 711 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 A3GALT2U3KPV4 340 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 ARHGAP21Q5T5U3 1957 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 CHD8Q9HCK8 2581 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 GTF3C1Q12789 2109 aa3.63□□□□□ -1.83
MCF2-201ENST00000338585 TRBV5-7A0A0A0MS05 114 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 TRAV1-2A0A0B4J238 106 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 ZNF587BE7ETH6 402 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 ARL6IP5O75915 188 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 PAHP00439 452 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 HLA-HP01893 362 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 CST2P09228 141 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 ACSM4P0C7M7 580 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 ATF1P18846 271 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 SRMP19623 302 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 RAB3BP20337 219 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 NPR2P20594 1047 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 S100A5P33763 92 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 PSG4Q00888 419 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 HGFACQ04756 655 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 FOXF2Q12947 444 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 DCTN2Q13561 401 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms