RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 TUBA1BP68363 451 aa12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 SCRN3Q0VDG4 424 aa12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 LY6DQ14210 128 aa12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ZNF829Q3KNS6 432 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 YIF1BQ5BJH7 314 aa12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ELFN2Q5R3F8 820 aa12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 FAM27D1Q5T7N8 215 aa12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 TUBA1AQ71U36 451 aa12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ZNF627Q7L945 461 aa12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 DOLPP1Q86YN1 238 aa12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 IL17RDQ8NFM7 739 aa12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 TSC22D3Q99576 134 aa12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 DDX28Q9NUL7 540 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 OR52A1Q9UKL2 312 aa12.92□□□□□ -0.34
CDK5RAP3-201ENST00000338399 TLN1Q9Y490 2541 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 TMEM212A6NML5 194 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 H3BSH0 61 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 DOK2O60496 412 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 TNFSF13O75888 250 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 CDRT1O95170 752 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 IL18BPO95998 194 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 IL2RAP01589 272 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 HOXD4P09016 255 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 TMIGD3P0DMS9 266 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 RPS19P39019 145 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 MMP16P51512 607 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 PCBD1P61457 104 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 GRB2P62993 217 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 GALK2Q01415 458 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 MXD1Q05195 221 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ZNF774Q6NX45 483 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 BTLAQ7Z6A9 289 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 SYT9Q86SS6 491 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 NAXEQ8NCW5 288 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 AKR7LQ8NHP1 331 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ZFAND2BQ8WV99 257 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 OR14A2Q96R54 314 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 PPIL3Q9H2H8 161 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 TP63Q9H3D4 680 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 NIPAL2Q9H841 368 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 FAM206AQ9NX38 181 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ZNF224Q9NZL3 707 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 TIMM10BQ9Y5J6 103 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 RTTNQ86VV8 2226 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 A0A1W2PPK0 400 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 SLC19A2O60779 497 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 SFTPCP11686 197 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 SDC2P34741 201 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 TIMP3P35625 211 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 CX3CR1P49238 355 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 PSG4Q00888 419 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 RAB35Q15286 201 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 DGUOKQ16854 277 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ZMAT1Q5H9K5 638 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ZNF283Q8N7M2 679 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 OR1K1Q8NGR3 316 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 OR10AC1Q8NH08 325 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 SLC7A6Q92536 515 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 KCNJ15Q99712 375 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 OR2H1Q9GZK4 316 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 TPK1Q9H3S4 243 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 RNF121Q9H920 327 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 PLSCR4Q9NRQ2 329 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 SNTG1Q9NSN8 517 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 ZNF835Q9Y2P0 537 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 N6AMT1Q9Y5N5 214 aa12.91□□□□□ -0.34
CDK5RAP3-201ENST00000338399 SHISA3A0PJX4 238 aa12.9□□□□□ -0.34
CDK5RAP3-201ENST00000338399 F5H5K5 113 aa12.9□□□□□ -0.34
CDK5RAP3-201ENST00000338399 SYNGR3O43761 229 aa12.9□□□□□ -0.34
CDK5RAP3-201ENST00000338399 MMP7P09237 267 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-201ENST00000338399 CLEC2LP0C7M8 214 aa12.9□□□□□ -0.34
CDK5RAP3-201ENST00000338399 SLC2A1P11166 492 aa12.9□□□□□ -0.34
CDK5RAP3-201ENST00000338399 IGHV1-2P23083 117 aa12.9□□□□□ -0.34
CDK5RAP3-201ENST00000338399 PSMA6P60900 246 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-201ENST00000338399 RSPO1Q2MKA7 263 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-201ENST00000338399 BCL2L15Q5TBC7 163 aa12.9□□□□□ -0.34
CDK5RAP3-201ENST00000338399 STARD4Q96DR4 205 aa12.9□□□□□ -0.34
CDK5RAP3-201ENST00000338399 PBOV1Q9GZY1 135 aa12.9□□□□□ -0.34
CDK5RAP3-201ENST00000338399 WNT5BQ9H1J7 359 aa12.9□□□□□ -0.34
CDK5RAP3-201ENST00000338399 TINAGQ9UJW2 476 aa12.9□□□□□ -0.34
CDK5RAP3-201ENST00000338399 PROCRQ9UNN8 238 aa12.9□□□□□ -0.34
CDK5RAP3-201ENST00000338399 SMIM30A4D0T7 59 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ZNF879B4DU55 563 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 HLA-HP01893 362 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 DBHP09172 617 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 GLI4P10075 376 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 EDN3P14138 238 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 SH3BGRP55822 239 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ZNF121P58317 390 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 SLC36A2Q495M3 483 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 HIKESHIQ53FT3 197 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 ANKRD16Q6P6B7 361 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 UNQ9370/PRO34162Q6UXP9 181 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 Q6ZT83 130 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 NAA40Q86UY6 237 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 OR51A4Q8NGJ6 313 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 OR1F12Q8NHA8 337 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 WACQ9BTA9 647 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 HDHD2Q9H0R4 259 aa12.89□□□□□ -0.35
CDK5RAP3-201ENST00000338399 OPN3Q9H1Y3 402 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms