RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 FOLR1P15328 257 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 ZNF25P17030 456 aaPredicted RBP12.03□□□□□ -0.48
COL2A1-201ENST00000337299 ZNF93P35789 620 aaPredicted RBP12.03□□□□□ -0.48
COL2A1-201ENST00000337299 ZNF41P51814 821 aaPredicted RBP12.03□□□□□ -0.48
COL2A1-201ENST00000337299 DVL1P1P54792 670 aaPredicted RBP12.03□□□□□ -0.48
COL2A1-201ENST00000337299 C1orf61Q13536 156 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 TOMM34Q15785 309 aaPredicted RBP12.03□□□□□ -0.48
COL2A1-201ENST00000337299 TMEM255AQ5JRV8 349 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 GGNBP1Q5YKI7 109 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 ARIH2OSQ8N7S6 290 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 OR56B1Q8NGI3 324 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 MS4A6EQ96DS6 147 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 TOX2Q96NM4 488 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 DCBLD2Q96PD2 775 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 NRIP2Q9BQI9 281 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 TMPRSS13Q9BYE2 586 aa12.03□□□□□ -0.48
COL2A1-201ENST00000337299 SIRT3Q9NTG7 399 aaPredicted RBP12.03□□□□□ -0.48
COL2A1-201ENST00000337299 CBY3A6NI87 242 aa12.02□□□□□ -0.48
COL2A1-201ENST00000337299 MBTPS2O43462 519 aa12.02□□□□□ -0.48
COL2A1-201ENST00000337299 SOX15O60248 233 aa12.02□□□□□ -0.48
COL2A1-201ENST00000337299 ICOSLGO75144 302 aa12.02□□□□□ -0.48
COL2A1-201ENST00000337299 C5AR1P21730 350 aa12.02□□□□□ -0.48
COL2A1-201ENST00000337299 RPS18P62269 152 aaKnown RBP12.02□□□□□ -0.48
COL2A1-201ENST00000337299 MPPED2Q15777 294 aa12.02□□□□□ -0.48
COL2A1-201ENST00000337299 ATPAF1Q5TC12 328 aaPredicted RBP12.02□□□□□ -0.48
COL2A1-201ENST00000337299 PBX4Q9BYU1 374 aa12.02□□□□□ -0.48
COL2A1-201ENST00000337299 TMED7Q9Y3B3 224 aa12.02□□□□□ -0.48
COL2A1-201ENST00000337299 ATG2BQ96BY7 2078 aa12.02□□□□□ -0.48
COL2A1-201ENST00000337299 CXorf65A6NEN9 183 aa12.02□□□□□ -0.49
COL2A1-201ENST00000337299 TSFMP43897 325 aaKnown RBP12.02□□□□□ -0.49
COL2A1-201ENST00000337299 RPL19P84098 196 aaKnown RBP12.02□□□□□ -0.49
COL2A1-201ENST00000337299 CD200R1LQ6Q8B3 271 aa12.02□□□□□ -0.49
COL2A1-201ENST00000337299 GLIPR1L1Q6UWM5 242 aa12.02□□□□□ -0.49
COL2A1-201ENST00000337299 RNF165Q6ZSG1 346 aa12.02□□□□□ -0.49
COL2A1-201ENST00000337299 AK3Q9UIJ7 227 aa12.02□□□□□ -0.49
COL2A1-201ENST00000337299 GDF2Q9UK05 429 aaPredicted RBP12.02□□□□□ -0.49
COL2A1-201ENST00000337299 DNAJC13O75165 2243 aa12.02□□□□□ -0.49
COL2A1-201ENST00000337299 OPN5Q6U736 354 aa12.02□□□□□ -0.49
COL2A1-201ENST00000337299 LCN15Q6UWW0 184 aa12.02□□□□□ -0.49
COL2A1-201ENST00000337299 TIPARPQ7Z3E1 657 aaKnown RBP12.02□□□□□ -0.49
COL2A1-201ENST00000337299 OR10AC1Q8NH08 325 aa12.02□□□□□ -0.49
COL2A1-201ENST00000337299 KLRF1Q9NZS2 232 aa12.02□□□□□ -0.49
COL2A1-201ENST00000337299 PRODH2Q9UF12 536 aa12.02□□□□□ -0.49
COL2A1-201ENST00000337299 VDAC3Q9Y277 283 aa12.02□□□□□ -0.49
COL2A1-201ENST00000337299 CEBPZOSA8MTT3 80 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 NUDT21O43809 227 aaKnown RBP12.01□□□□□ -0.49
COL2A1-201ENST00000337299 PNMTP11086 282 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 CEBPBP17676 345 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 EEF1A1P68104 462 aaKnown RBP12.01□□□□□ -0.49
COL2A1-201ENST00000337299 EEF1A2Q05639 463 aaKnown RBP12.01□□□□□ -0.49
COL2A1-201ENST00000337299 PLCXD2Q0VAA5 305 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 DOC2BQ14184 412 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 TMEM41BQ5BJD5 291 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 EEF1A1P5Q5VTE0 462 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 ZNF440Q8IYI8 595 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 LIN37Q96GY3 246 aaPredicted RBP12.01□□□□□ -0.49
COL2A1-201ENST00000337299 RAB22AQ9UL26 194 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 MOKQ9UQ07 419 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 DICER1Q9UPY3 1922 aaKnown RBP12.01□□□□□ -0.49
COL2A1-201ENST00000337299 LOC107986453A0A1B0GWG9 222 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 WNT11O96014 354 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 HEXBP07686 556 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 PAX6P26367 422 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 SULT1A1P50225 295 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 EFNB2P52799 333 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 C2orf68Q2NKX9 166 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 OR5L1Q8NGL2 311 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 OR9A4Q8NGU2 314 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 FBXO34Q9NWN3 711 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 C9orf170A2RU37 121 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 CPED1A4D0V7 1026 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 PPP5D1E7EU14 171 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 ACAA1P09110 424 aaPredicted RBP12.01□□□□□ -0.49
COL2A1-201ENST00000337299 HMGA1P17096 107 aaKnown RBP12.01□□□□□ -0.49
COL2A1-201ENST00000337299 FGF13Q92913 245 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 ZFYVE21Q9BQ24 234 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 SDHAF3Q9NRP4 125 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 NXT1Q9UKK6 140 aaKnown RBP12.01□□□□□ -0.49
COL2A1-201ENST00000337299 GPR34Q9UPC5 381 aa12.01□□□□□ -0.49
COL2A1-201ENST00000337299 MDKP21741 143 aaPredicted RBP12□□□□□ -0.49
COL2A1-201ENST00000337299 FGF7P21781 194 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 CASP6P55212 293 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 RAB1AP62820 205 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 MFGE8Q08431 387 aaPredicted RBP12□□□□□ -0.49
COL2A1-201ENST00000337299 ACER2Q5QJU3 275 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 NR2C2APQ86WQ0 139 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 TMEM37Q8WXS4 190 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 SDSLQ96GA7 329 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 TRMT2BQ96GJ1 504 aaKnown RBP12□□□□□ -0.49
COL2A1-201ENST00000337299 SGCZQ96LD1 299 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 LPAR3Q9UBY5 353 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 KCNS2Q9ULS6 477 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 ANKRD31Q8N7Z5 1873 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 DSPPQ9NZW4 1301 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 OR6C6A6NF89 314 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 PHF1O43189 567 aaPredicted RBP12□□□□□ -0.49
COL2A1-201ENST00000337299 PGCP20142 388 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 CRABP1P29762 137 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 TLE3Q04726 772 aa12□□□□□ -0.49
COL2A1-201ENST00000337299 ZNF528Q3MIS6 628 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms