RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 RIDAP52758 137 aaKnown RBP12.35□□□□□ -0.43
SYNE3-201ENST00000334258 ADPRHP54922 357 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 ZNF74Q16587 644 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 TRAPPC6BQ86SZ2 158 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 SLC25A42Q86VD7 318 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 FAM219AQ8IW50 185 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 NUBPLQ8TB37 319 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 MITD1Q8WV92 249 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 SMIM10Q96HG1 83 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 LPAR4Q99677 370 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 MRPS18BQ9Y676 258 aaKnown RBP12.35□□□□□ -0.43
SYNE3-201ENST00000334258 TBC1D3DA0A087WVF3 549 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 TBC1D3LB9A6J9 549 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 WRBO00258 174 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 FGF16O43320 207 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 IGHV2-70P01814 119 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 TBC1D3HP0C7X1 549 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 NDUFB7P17568 137 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 S100PP25815 95 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 DCDP81605 110 aaKnown RBP12.35□□□□□ -0.43
SYNE3-201ENST00000334258 SLC22A6Q4U2R8 563 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 TBC1D3CQ6IPX1 549 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 FJX1Q86VR8 437 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 TBC1D3Q8IZP1 549 aaPredicted RBP12.35□□□□□ -0.43
SYNE3-201ENST00000334258 ADAD2Q8NCV1 583 aaKnown RBP12.35□□□□□ -0.43
SYNE3-201ENST00000334258 CCL4L1Q8NHW4 92 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 ZNF563Q8TA94 476 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 THRSPQ92748 146 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 OR51M1Q9H341 326 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 HEATR5AQ86XA9 2040 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 MPDZO75970 2070 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 METTL21EPA6NDL7 271 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 PNPP00491 289 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 CRHP06850 196 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 TACR3P29371 465 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 RPS4XP62701 263 aaKnown RBP12.35□□□□□ -0.43
SYNE3-201ENST00000334258 MESTQ5EB52 335 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 SSX9Q7RTT3 188 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 ADGRE4PQ86SQ3 457 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 NAA40Q86UY6 237 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 NUDCD2Q8WVJ2 157 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 FAM3CQ92520 227 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 GTF3AQ92664 365 aaKnown RBP12.35□□□□□ -0.43
SYNE3-201ENST00000334258 TM4SF19Q96DZ7 209 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 MRPS33Q9Y291 106 aaKnown RBP12.35□□□□□ -0.43
SYNE3-201ENST00000334258 SLC17A4Q9Y2C5 497 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 HIF3AQ9Y2N7 669 aa12.35□□□□□ -0.43
SYNE3-201ENST00000334258 IGKV1D-42A0A075B6H8 117 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 A0A1W2PPC1 479 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 MUC1P15941 1255 aaPredicted RBP12.34□□□□□ -0.43
SYNE3-201ENST00000334258 G0S2P27469 103 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 SLC17A1Q14916 467 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 ELAVL1Q15717 326 aaKnown RBP12.34□□□□□ -0.43
SYNE3-201ENST00000334258 EIF2S3LQ2VIR3 472 aaKnown RBP12.34□□□□□ -0.43
SYNE3-201ENST00000334258 EXOSC6Q5RKV6 272 aaKnown RBP12.34□□□□□ -0.43
SYNE3-201ENST00000334258 FOXRED2Q8IWF2 684 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 ZC3H10Q96K80 434 aaKnown RBP12.34□□□□□ -0.43
SYNE3-201ENST00000334258 OR2M4Q96R27 311 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 NRIP2Q9BQI9 281 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 G6PC3Q9BUM1 346 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 APOOQ9BUR5 198 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 UFSP2Q9NUQ7 469 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 PILRAQ9UKJ1 303 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 B9D1Q9UPM9 204 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 SERPINA5P05154 406 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 SLC35E2P0CK97 266 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 HRH1P35367 487 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 CSNK1A1LQ8N752 337 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 OTOSQ8NHW6 89 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 ANKRD9Q96BM1 317 aaPredicted RBP12.34□□□□□ -0.43
SYNE3-201ENST00000334258 CTHRC1Q96CG8 243 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 SLC25A36Q96CQ1 311 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 RHOVQ96L33 236 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 EDEM2Q9BV94 578 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 SLC17A9Q9BYT1 436 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 MYOZ1Q9NP98 299 aaPredicted RBP12.34□□□□□ -0.43
SYNE3-201ENST00000334258 SMCO4Q9NRQ5 59 aa12.34□□□□□ -0.43
SYNE3-201ENST00000334258 ICOSLGO75144 302 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 APBB3O95704 486 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 SFTA3P0C7M3 94 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 SMIM6P0DI80 62 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 CD79AP11912 226 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 EDN3P14138 238 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 CD80P33681 288 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 DEFA6Q01524 100 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 CHAF1BQ13112 559 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 ANKRD39Q53RE8 183 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 ACER2Q5QJU3 275 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 TMPPEQ6ZT21 453 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 PARGQ86W56 976 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 SKA3Q8IX90 412 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 OR13C3Q8NGS6 347 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 OR9A4Q8NGU2 314 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 TSPAN32Q96QS1 320 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 GPX7Q96SL4 187 aaPredicted RBP12.33□□□□□ -0.44
SYNE3-201ENST00000334258 MMP25Q9NPA2 562 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 RPS10P5Q9NQ39 176 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 GHRLQ9UBU3 117 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 PCDHGA1Q9Y5H4 931 aa12.33□□□□□ -0.44
SYNE3-201ENST00000334258 CD74P04233 296 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms