RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 Q499Y3 187 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 EEF1A1P5Q5VTE0 462 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 OR4C15Q8NGM1 316 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 RASL10BQ96S79 203 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 MED18Q9BUE0 208 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 DEFB127Q9H1M4 99 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 MEPEQ9NQ76 525 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-201ENST00000334136 KCNIP3Q9Y2W7 256 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 TRIM64A6NGJ6 449 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 GABARAPH6UMI1 98 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 SUSD5O60279 629 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 LIFP15018 202 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 SLC10A1Q14973 349 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 ST3GAL2Q16842 350 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 CLVS2Q5SYC1 327 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 RNF113BQ8IZP6 322 aaKnown RBP10.64□□□□□ -0.71
HDAC6-201ENST00000334136 FAM71F1Q96KD3 344 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-201ENST00000334136 TSSK2Q96PF2 358 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 ZNF587Q96SQ5 575 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-201ENST00000334136 MRI1Q9BV20 369 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 PTDSS2Q9BVG9 487 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 TSPAN10Q9H1Z9 355 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-201ENST00000334136 LUZP4Q9P127 313 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 KDM4EB2RXH2 506 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-201ENST00000334136 ERVH48-1M5A8F1 160 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 SNAPINO95295 136 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 NTN1O95631 604 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 LIMK1P53667 647 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 RPS27AP62979 156 aaKnown RBP10.64□□□□□ -0.71
HDAC6-201ENST00000334136 UBA52P62987 128 aaKnown RBP10.64□□□□□ -0.71
HDAC6-201ENST00000334136 RHEBQ15382 184 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 LIPNQ5VXI9 398 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 COX15Q7KZN9 410 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 VSTM2LQ96N03 204 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 PFDN5Q99471 154 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 URM1Q9BTM9 101 aaKnown RBP10.64□□□□□ -0.71
HDAC6-201ENST00000334136 PLXNA2O75051 1894 aa10.64□□□□□ -0.71
HDAC6-201ENST00000334136 H7C417 338 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 SLC33A1O00400 549 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-201ENST00000334136 SYT7O43581 403 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 POU3F4P49335 361 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 PPIAP62937 165 aaKnown RBP10.63□□□□□ -0.71
HDAC6-201ENST00000334136 RIPPLY1Q0D2K3 151 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 SGCAQ16586 387 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 H3F3CQ6NXT2 135 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 GRINAQ7Z429 371 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 CSNK2A3Q8NEV1 391 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 OR5H2Q8NGV7 314 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 LAT2Q9GZY6 243 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 TMEM231Q9H6L2 316 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 ZNF71Q9NQZ8 489 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-201ENST00000334136 ZNF850A8MQ14 1090 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 FFAR1O14842 300 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 FGF9P31371 208 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-201ENST00000334136 HMGA2P52926 109 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 CLRN1P58418 232 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 PSG6Q00889 435 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 PEA15Q15121 130 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 SLC6A19Q695T7 634 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 UEVLDQ8IX04 471 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 OR4Q3Q8NH05 313 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 MMP25Q9NPA2 562 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 FBXO34Q9NWN3 711 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 A0A0D9SG52 128 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 MEGF11A6BM72 1044 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 ARRDC5A6NEK1 342 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 LEUTXA8MZ59 168 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 IFNGR1P15260 489 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 RAB3AP20336 220 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 SLC22A6Q4U2R8 563 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 DGAT2L6Q6ZPD8 337 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 OR5M1Q8NGP8 315 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 NKX3-1Q99801 234 aaPredicted RBP10.63□□□□□ -0.71
HDAC6-201ENST00000334136 AICDAQ9GZX7 198 aa10.63□□□□□ -0.71
HDAC6-201ENST00000334136 CHD9Q3L8U1 2897 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 MDC1Q14676 2089 aaKnown RBP10.62□□□□□ -0.71
HDAC6-201ENST00000334136 GGT3PA6NGU5 568 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 GIPP09681 153 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-201ENST00000334136 HIST1H1CP16403 213 aaKnown RBP10.62□□□□□ -0.71
HDAC6-201ENST00000334136 ATF1P18846 271 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 MAGEB1P43366 347 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 GZMMP51124 257 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 MAP2K6P52564 334 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 CYCSP99999 105 aaKnown RBP10.62□□□□□ -0.71
HDAC6-201ENST00000334136 TNK1Q13470 666 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 ZNF766Q5HY98 468 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 TIPARPQ7Z3E1 657 aaKnown RBP10.62□□□□□ -0.71
HDAC6-201ENST00000334136 ELP5Q8TE02 316 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 RADILQ96JH8 1075 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 PRRT1Q99946 306 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 PARP12Q9H0J9 701 aaKnown RBP10.62□□□□□ -0.71
HDAC6-201ENST00000334136 LRRK1Q38SD2 2015 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 LY6G6EA0A0G2JKS1 128 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 MED6O75586 246 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 CBR3O75828 277 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 TBX6O95947 436 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-201ENST00000334136 EPXP11678 715 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 TBXA2RP21731 343 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 ACHEP22303 614 aa10.62□□□□□ -0.71
HDAC6-201ENST00000334136 NME2P22392 152 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms