RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 NKX6-1P78426 367 aaPredicted RBP17.71■□□□□ 0.43
MRPL40-201ENST00000333130 ECH1Q13011 328 aa17.71■□□□□ 0.43
MRPL40-201ENST00000333130 TMED1Q13445 227 aa17.71■□□□□ 0.43
MRPL40-201ENST00000333130 MAD2L1BPQ15013 274 aaPredicted RBP17.71■□□□□ 0.43
MRPL40-201ENST00000333130 ELFN2Q5R3F8 820 aa17.71■□□□□ 0.43
MRPL40-201ENST00000333130 ERI1Q8IV48 349 aaKnown RBP17.71■□□□□ 0.43
MRPL40-201ENST00000333130 LINC00346Q8IVM7 164 aa17.71■□□□□ 0.43
MRPL40-201ENST00000333130 OR1F12Q8NHA8 337 aa17.71■□□□□ 0.43
MRPL40-201ENST00000333130 APH1BQ8WW43 257 aa17.71■□□□□ 0.43
MRPL40-201ENST00000333130 GDF2Q9UK05 429 aaPredicted RBP17.71■□□□□ 0.43
MRPL40-201ENST00000333130 MYO9AB2RTY4 2548 aa17.71■□□□□ 0.43
MRPL40-201ENST00000333130 CSMD1Q96PZ7 3565 aa17.7■□□□□ 0.42
MRPL40-201ENST00000333130 SELENOFO60613 162 aa17.7■□□□□ 0.42
MRPL40-201ENST00000333130 ENTPD6O75354 484 aa17.7■□□□□ 0.42
MRPL40-201ENST00000333130 OR4A8P0C604 315 aa17.7■□□□□ 0.42
MRPL40-201ENST00000333130 THBS4P35443 961 aa17.7■□□□□ 0.42
MRPL40-201ENST00000333130 RPS27P42677 84 aaKnown RBP17.7■□□□□ 0.42
MRPL40-201ENST00000333130 HSPA13P48723 471 aa17.7■□□□□ 0.42
MRPL40-201ENST00000333130 CCDC92Q53HC0 331 aaPredicted RBP17.7■□□□□ 0.42
MRPL40-201ENST00000333130 C6orf52Q5T4I8 152 aa17.7■□□□□ 0.42
MRPL40-201ENST00000333130 RGS7BPQ6MZT1 257 aaPredicted RBP17.7■□□□□ 0.42
MRPL40-201ENST00000333130 CORO6Q6QEF8 472 aa17.7■□□□□ 0.42
MRPL40-201ENST00000333130 CFAP77Q6ZQR2 320 aa17.7■□□□□ 0.42
MRPL40-201ENST00000333130 SHFQ7M4L6 423 aa17.7■□□□□ 0.42
MRPL40-201ENST00000333130 OR6N2Q8NGY6 317 aa17.7■□□□□ 0.42
MRPL40-201ENST00000333130 TRMT61AQ96FX7 289 aaKnown RBP17.7■□□□□ 0.42
MRPL40-201ENST00000333130 DCLRE1CQ96SD1 692 aaKnown RBP17.7■□□□□ 0.42
MRPL40-201ENST00000333130 COQ7Q99807 217 aa17.7■□□□□ 0.42
MRPL40-201ENST00000333130 TRAF4Q9BUZ4 470 aaPredicted RBP17.7■□□□□ 0.42
MRPL40-201ENST00000333130 PNRC2Q9NPJ4 139 aaKnown RBP17.7■□□□□ 0.42
MRPL40-201ENST00000333130 AASSQ9UDR5 926 aa17.7■□□□□ 0.42
MRPL40-201ENST00000333130 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.7■□□□□ 0.42
MRPL40-201ENST00000333130 PMF1-BGLAPU3KQ54 211 aa17.7■□□□□ 0.42
MRPL40-201ENST00000333130 LOC100509620A0A075B734 347 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 B9A039 149 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 SYNGR3O43761 229 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 WBP4O75554 376 aaKnown RBP17.69■□□□□ 0.42
MRPL40-201ENST00000333130 ABHD16AO95870 558 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 LCKP06239 509 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 FAM157BP0CG42 384 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 UCP2P55851 309 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 IL5RAQ01344 420 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 ADIPOQQ15848 244 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 SNCBQ16143 134 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 TMEM154Q6P9G4 183 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 SLC16A9Q7RTY1 509 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 C8orf59Q8N0T1 100 aaPredicted RBP17.69■□□□□ 0.42
MRPL40-201ENST00000333130 ST7LQ8TDW4 575 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 FBLIM1Q8WUP2 373 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 MAP6Q96JE9 813 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 Q96MT0 163 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 COG8Q96MW5 612 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 CNN2Q99439 309 aaKnown RBP17.69■□□□□ 0.42
MRPL40-201ENST00000333130 ATF6BQ99941 703 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 OR51B6Q9H340 312 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 PLK3Q9H4B4 646 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 ADGRL4Q9HBW9 690 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 ITGB1BP2Q9UKP3 347 aa17.69■□□□□ 0.42
MRPL40-201ENST00000333130 USF3Q68DE3 2245 aa17.68■□□□□ 0.42
MRPL40-201ENST00000333130 NAA10P41227 235 aaPredicted RBP17.68■□□□□ 0.42
MRPL40-201ENST00000333130 RGS6P49758 472 aa17.68■□□□□ 0.42
MRPL40-201ENST00000333130 ART1P52961 327 aa17.68■□□□□ 0.42
MRPL40-201ENST00000333130 POU4F2Q12837 409 aa17.68■□□□□ 0.42
MRPL40-201ENST00000333130 DPY19L4Q7Z388 723 aa17.68■□□□□ 0.42
MRPL40-201ENST00000333130 PAQR4Q8N4S7 273 aaPredicted RBP17.68■□□□□ 0.42
MRPL40-201ENST00000333130 OR10S1Q8NGN2 331 aa17.68■□□□□ 0.42
MRPL40-201ENST00000333130 OTOSQ8NHW6 89 aa17.68■□□□□ 0.42
MRPL40-201ENST00000333130 C4orf45Q96LM5 186 aa17.68■□□□□ 0.42
MRPL40-201ENST00000333130 FOXC2Q99958 501 aa17.68■□□□□ 0.42
MRPL40-201ENST00000333130 YIPF3Q9GZM5 350 aa17.68■□□□□ 0.42
MRPL40-201ENST00000333130 CLN6Q9NWW5 311 aa17.68■□□□□ 0.42
MRPL40-201ENST00000333130 SNTNA6NMZ2 147 aa17.67■□□□□ 0.42
MRPL40-201ENST00000333130 GPRIN2O60269 458 aa17.67■□□□□ 0.42
MRPL40-201ENST00000333130 TAF13Q15543 124 aa17.67■□□□□ 0.42
MRPL40-201ENST00000333130 EFNB3Q15768 340 aa17.67■□□□□ 0.42
MRPL40-201ENST00000333130 DCXRQ7Z4W1 244 aa17.67■□□□□ 0.42
MRPL40-201ENST00000333130 LRRC75A-AS1Q8N1F1 130 aa17.67■□□□□ 0.42
MRPL40-201ENST00000333130 ZNF454Q8N9F8 522 aa17.67■□□□□ 0.42
MRPL40-201ENST00000333130 OR1J1Q8NGS3 322 aa17.67■□□□□ 0.42
MRPL40-201ENST00000333130 ABHD4Q8TB40 342 aa17.67■□□□□ 0.42
MRPL40-201ENST00000333130 SPTSSAQ969W0 71 aa17.67■□□□□ 0.42
MRPL40-201ENST00000333130 MRPL24Q96A35 216 aaKnown RBP17.67■□□□□ 0.42
MRPL40-201ENST00000333130 ANKRD60Q9BZ19 345 aa17.67■□□□□ 0.42
MRPL40-201ENST00000333130 DDX28Q9NUL7 540 aaKnown RBP17.67■□□□□ 0.42
MRPL40-201ENST00000333130 GPR160Q9UJ42 338 aa17.67■□□□□ 0.42
MRPL40-201ENST00000333130 GRIP1Q9Y3R0 1128 aa17.67■□□□□ 0.42
MRPL40-201ENST00000333130 ARFGEF3Q5TH69 2177 aa17.67■□□□□ 0.42
MRPL40-201ENST00000333130 J3QW42 95 aa17.66■□□□□ 0.42
MRPL40-201ENST00000333130 ICMTO60725 284 aa17.66■□□□□ 0.42
MRPL40-201ENST00000333130 ERCC1P07992 297 aaPredicted RBP17.66■□□□□ 0.42
MRPL40-201ENST00000333130 MRPL3P09001 348 aaKnown RBP17.66■□□□□ 0.42
MRPL40-201ENST00000333130 SBK2P0C263 348 aa17.66■□□□□ 0.42
MRPL40-201ENST00000333130 TUBG1P23258 451 aa17.66■□□□□ 0.42
MRPL40-201ENST00000333130 SLC15A1P46059 708 aa17.66■□□□□ 0.42
MRPL40-201ENST00000333130 MTNR1AP48039 350 aa17.66■□□□□ 0.42
MRPL40-201ENST00000333130 EIF2B1Q14232 305 aaKnown RBP17.66■□□□□ 0.42
MRPL40-201ENST00000333130 KRTAP27-1Q3LI81 207 aa17.66■□□□□ 0.42
MRPL40-201ENST00000333130 CNIH3Q8TBE1 160 aa17.66■□□□□ 0.42
MRPL40-201ENST00000333130 ZNF184Q99676 751 aaPredicted RBP17.66■□□□□ 0.42
MRPL40-201ENST00000333130 CACNG6Q9BXT2 260 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms