RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 RPS27P42677 84 aaKnown RBP16.35■□□□□ 0.21
PKP3-201ENST00000331563 SCAND1P57086 179 aa16.35■□□□□ 0.21
PKP3-201ENST00000331563 SSBP1Q04837 148 aaKnown RBP16.35■□□□□ 0.21
PKP3-201ENST00000331563 DHRS11Q6UWP2 260 aa16.35■□□□□ 0.21
PKP3-201ENST00000331563 CLEC9AQ6UXN8 241 aa16.35■□□□□ 0.21
PKP3-201ENST00000331563 RD3Q7Z3Z2 195 aa16.35■□□□□ 0.21
PKP3-201ENST00000331563 ZNF584Q8IVC4 421 aa16.35■□□□□ 0.21
PKP3-201ENST00000331563 WNT5BQ9H1J7 359 aa16.35■□□□□ 0.21
PKP3-201ENST00000331563 CFAP54Q96N23 3096 aa16.35■□□□□ 0.21
PKP3-201ENST00000331563 ARID1AO14497 2285 aa16.35■□□□□ 0.21
PKP3-201ENST00000331563 TRBV23OR9-2A0A075B6M9 112 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 C4orf47A7E2U8 309 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 EIF1AYO14602 144 aaKnown RBP16.34■□□□□ 0.21
PKP3-201ENST00000331563 RAB4AP20338 218 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 ZBTB25P24278 435 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 LTBRP36941 435 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 SERPINF1P36955 418 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 EIF1AXP47813 144 aaKnown RBP16.34■□□□□ 0.21
PKP3-201ENST00000331563 BPIFB3P59826 476 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 SGCGQ13326 291 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 CARFQ8N187 725 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 OR6X1Q8NH79 312 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 NKD1Q969G9 470 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 TUBA4BQ9H853 241 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 SRA1Q9HD15 236 aaKnown RBP16.34■□□□□ 0.21
PKP3-201ENST00000331563 TMED7Q9Y3B3 224 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 TRBV5-5A0A0J9YX44 114 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 FAM221BA6H8Z2 402 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 TVP23AA6NH52 213 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 UPK3AO75631 287 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 GLCEO94923 617 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 KLF8O95600 359 aaPredicted RBP16.34■□□□□ 0.21
PKP3-201ENST00000331563 CRHP06850 196 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 NAAAQ02083 359 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 FOXO1Q12778 655 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 FHL1Q13642 323 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 GAMTQ14353 236 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 SURF2Q15527 256 aaPredicted RBP16.34■□□□□ 0.21
PKP3-201ENST00000331563 RNASE10Q5GAN6 216 aaKnown RBP16.34■□□□□ 0.21
PKP3-201ENST00000331563 SLC35D3Q5M8T2 416 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 UBAC2Q8NBM4 344 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 OR2A1Q8NGT9 310 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 RPS4Y2Q8TD47 263 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 RNF166Q96A37 237 aaPredicted RBP16.34■□□□□ 0.21
PKP3-201ENST00000331563 MALSU1Q96EH3 234 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 ELF4Q99607 663 aaPredicted RBP16.34■□□□□ 0.21
PKP3-201ENST00000331563 TWSG1Q9GZX9 223 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 LAMP5Q9UJQ1 280 aa16.34■□□□□ 0.21
PKP3-201ENST00000331563 MRPS33Q9Y291 106 aaKnown RBP16.34■□□□□ 0.21
PKP3-201ENST00000331563 A0A0B4J2E0 115 aa16.33■□□□□ 0.21
PKP3-201ENST00000331563 A0A1B0GX12 115 aa16.33■□□□□ 0.21
PKP3-201ENST00000331563 FITM1A5D6W6 292 aa16.33■□□□□ 0.21
PKP3-201ENST00000331563 BCAT2O15382 392 aaPredicted RBP16.33■□□□□ 0.21
PKP3-201ENST00000331563 ADAMTSL4Q6UY14 1074 aa16.33■□□□□ 0.21
PKP3-201ENST00000331563 RNF44Q7L0R7 432 aa16.33■□□□□ 0.21
PKP3-201ENST00000331563 FAM24BQ8N5W8 94 aa16.33■□□□□ 0.21
PKP3-201ENST00000331563 MITD1Q8WV92 249 aa16.33■□□□□ 0.21
PKP3-201ENST00000331563 RRNAD1Q96FB5 475 aaKnown RBP16.33■□□□□ 0.21
PKP3-201ENST00000331563 MYOZ1Q9NP98 299 aaPredicted RBP16.33■□□□□ 0.21
PKP3-201ENST00000331563 WIF1Q9Y5W5 379 aa16.33■□□□□ 0.21
PKP3-201ENST00000331563 ARHGEF17Q96PE2 2063 aaPredicted RBP16.33■□□□□ 0.2
PKP3-201ENST00000331563 SCN2AQ99250 2005 aa16.33■□□□□ 0.2
PKP3-201ENST00000331563 C9JQL5 133 aa16.33■□□□□ 0.2
PKP3-201ENST00000331563 LRP3O75074 770 aa16.33■□□□□ 0.2
PKP3-201ENST00000331563 IFNA2P01563 188 aa16.33■□□□□ 0.2
PKP3-201ENST00000331563 ERCC1P07992 297 aaPredicted RBP16.33■□□□□ 0.2
PKP3-201ENST00000331563 EDN3P14138 238 aa16.33■□□□□ 0.2
PKP3-201ENST00000331563 C5AR1P21730 350 aa16.33■□□□□ 0.2
PKP3-201ENST00000331563 ZIC1Q15915 447 aa16.33■□□□□ 0.2
PKP3-201ENST00000331563 NSUN5P2Q63ZY6 315 aa16.33■□□□□ 0.2
PKP3-201ENST00000331563 PAPD4Q6PIY7 484 aaKnown RBP16.33■□□□□ 0.2
PKP3-201ENST00000331563 TMPPEQ6ZT21 453 aa16.33■□□□□ 0.2
PKP3-201ENST00000331563 SLC25A42Q86VD7 318 aa16.33■□□□□ 0.2
PKP3-201ENST00000331563 SECTM1Q8WVN6 248 aa16.33■□□□□ 0.2
PKP3-201ENST00000331563 KIRREL1Q96J84 757 aa16.33■□□□□ 0.2
PKP3-201ENST00000331563 PRO1933Q9H354 126 aa16.33■□□□□ 0.2
PKP3-201ENST00000331563 MKKSQ9NPJ1 570 aaPredicted RBP16.33■□□□□ 0.2
PKP3-201ENST00000331563 TMEM184BQ9Y519 407 aaPredicted RBP16.33■□□□□ 0.2
PKP3-201ENST00000331563 ENTPD2Q9Y5L3 495 aa16.33■□□□□ 0.2
PKP3-201ENST00000331563 ARID1BQ8NFD5 2236 aaPredicted RBP16.33■□□□□ 0.2
PKP3-201ENST00000331563 HOXB2P14652 356 aa16.32■□□□□ 0.2
PKP3-201ENST00000331563 LPAR6P43657 344 aa16.32■□□□□ 0.2
PKP3-201ENST00000331563 LSSP48449 732 aa16.32■□□□□ 0.2
PKP3-201ENST00000331563 BIKQ13323 160 aa16.32■□□□□ 0.2
PKP3-201ENST00000331563 RSU1Q15404 277 aa16.32■□□□□ 0.2
PKP3-201ENST00000331563 OR8G1Q15617 311 aa16.32■□□□□ 0.2
PKP3-201ENST00000331563 METRNLQ641Q3 311 aa16.32■□□□□ 0.2
PKP3-201ENST00000331563 TMEM184AQ6ZMB5 413 aa16.32■□□□□ 0.2
PKP3-201ENST00000331563 ANGPTL5Q86XS5 388 aa16.32■□□□□ 0.2
PKP3-201ENST00000331563 PAQR4Q8N4S7 273 aaPredicted RBP16.32■□□□□ 0.2
PKP3-201ENST00000331563 ZSCAN4Q8NAM6 433 aaPredicted RBP16.32■□□□□ 0.2
PKP3-201ENST00000331563 LRFN5Q96NI6 719 aa16.32■□□□□ 0.2
PKP3-201ENST00000331563 TGM7Q96PF1 710 aa16.32■□□□□ 0.2
PKP3-201ENST00000331563 INSM2Q96T92 566 aaPredicted RBP16.32■□□□□ 0.2
PKP3-201ENST00000331563 MENTQ9BUN1 341 aa16.32■□□□□ 0.2
PKP3-201ENST00000331563 SUCNR1Q9BXA5 334 aa16.32■□□□□ 0.2
PKP3-201ENST00000331563 SLC17A9Q9BYT1 436 aa16.32■□□□□ 0.2
PKP3-201ENST00000331563 RGCCQ9H4X1 137 aa16.32■□□□□ 0.2
PKP3-201ENST00000331563 FN3KRPQ9HA64 309 aa16.32■□□□□ 0.2
PKP3-201ENST00000331563 CYTL1Q9NRR1 136 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms