RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 COMMD4Q9H0A8 199 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 TXNIPQ9H3M7 391 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 SLC25A19Q9HC21 320 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 A0A087WV48 116 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 TMEM269A0A1B0GVZ9 245 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 A0A1W2PQD3 144 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 IRGMA1A4Y4 181 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 PTP4A3O75365 173 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 SLC43A1O75387 559 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 KHDRBS3O75525 346 aaKnown RBP14.15□□□□□ -0.14
PDGFB-201ENST00000331163 RGS11O94810 467 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 ARHGDIBP52566 201 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 HES5Q5TA89 166 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 GPR139Q6DWJ6 353 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 SLC51BQ86UW2 128 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 DNAAF1Q8NEP3 725 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 C17orf47Q8NEP4 570 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 POC1BQ8TC44 478 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 ZC3HAV1LQ96H79 300 aaKnown RBP14.15□□□□□ -0.14
PDGFB-201ENST00000331163 NRIP3Q9NQ35 241 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 PLCE1Q9P212 2302 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 PKD1L2Q7Z442 2459 aa14.15□□□□□ -0.14
PDGFB-201ENST00000331163 LOC102723996A0A087X1L8 192 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 A0A0B4J203 849 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 ARRDC5A6NEK1 342 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 GABRPO00591 440 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 MT-ATP6P00846 226 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 BGLAPP02818 100 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 M6PRP20645 277 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 CNR1P21554 472 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 ADH7P40394 386 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 SUCLG1P53597 346 aaKnown RBP14.14□□□□□ -0.15
PDGFB-201ENST00000331163 SNU13P55769 128 aaKnown RBP14.14□□□□□ -0.15
PDGFB-201ENST00000331163 SLC18B1Q6NT16 456 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 ADAM19Q9H013 955 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 UBQLN2Q9UHD9 624 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 ADAM30Q9UKF2 790 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 B9D1Q9UPM9 204 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 LIPGQ9Y5X9 500 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 GJE1A6NN92 205 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 LRP3O75074 770 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 TFP02787 698 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 MT-ND4P03905 459 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 RAF1P04049 648 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 CSRP1P21291 193 aaKnown RBP14.14□□□□□ -0.15
PDGFB-201ENST00000331163 MAP2K6P52564 334 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 TSPAN5P62079 268 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 AANATQ16613 207 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 OCLNQ16625 522 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 TMEM44Q2T9K0 475 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 FCRLAQ7L513 359 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 AKR7LQ8NHP1 331 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 ADAMTS14Q8WXS8 1223 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 OR51J1Q9H342 316 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 EXOSC3Q9NQT5 275 aaKnown RBP14.14□□□□□ -0.15
PDGFB-201ENST00000331163 FBXL3Q9UKT7 428 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 HIF3AQ9Y2N7 669 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 HEATR1Q9H583 2144 aaKnown RBP14.14□□□□□ -0.15
PDGFB-201ENST00000331163 WISP2O76076 250 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 IFNA7P01567 189 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 HLA-DPB1P04440 258 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 TACSTD2P09758 323 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 CRABP1P29762 137 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 OR10A3P58181 314 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 HSF2Q03933 536 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 ACSM3Q53FZ2 586 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 TMEM201Q5SNT2 666 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 ZNF813Q6ZN06 617 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 TUSC5Q8IXB3 177 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 OR5D18Q8NGL1 313 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 IP6K3Q96PC2 410 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 CACNG6Q9BXT2 260 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 PPP1R3EQ9H7J1 279 aa14.14□□□□□ -0.15
PDGFB-201ENST00000331163 DIMT1Q9UNQ2 313 aaKnown RBP14.14□□□□□ -0.15
PDGFB-201ENST00000331163 M0R233 179 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 SHOXO15266 292 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 NEURL1O76050 574 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 GLCEO94923 617 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 KDM4BO94953 1096 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 RIDAP52758 137 aaKnown RBP14.13□□□□□ -0.15
PDGFB-201ENST00000331163 GCDHQ92947 438 aaPredicted RBP14.13□□□□□ -0.15
PDGFB-201ENST00000331163 MS4A3Q96HJ5 214 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 AMELYQ99218 206 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 ATF6BQ99941 703 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 MARVELD1Q9BSK0 173 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 TRAF4Q9BUZ4 470 aaPredicted RBP14.13□□□□□ -0.15
PDGFB-201ENST00000331163 KCNN2Q9H2S1 579 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 ZNF552Q9H707 407 aaPredicted RBP14.13□□□□□ -0.15
PDGFB-201ENST00000331163 SLCO1C1Q9NYB5 712 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 B3GALT5Q9Y2C3 310 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 IGKV1D-43A0A0B4J1Z2 117 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 ANXA2P2A6NMY6 339 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 ZIC3O60481 467 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 DPM1O60762 260 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 LCATP04180 440 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 RAB40ALP0C0E4 278 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 ZNF84P51523 738 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 FNDC7Q5VTL7 733 aa14.13□□□□□ -0.15
PDGFB-201ENST00000331163 KCTD18Q6PI47 426 aaPredicted RBP14.13□□□□□ -0.15
PDGFB-201ENST00000331163 FAM57BQ71RH2 274 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms