RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 K7ERU9 68 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 M0QZQ0 153 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 LAG3P18627 525 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 ERVK-16P61578 105 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 GPNMBQ14956 572 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 CARD17Q5XLA6 110 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 STAC2Q6ZMT1 411 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 LRRTM1Q86UE6 522 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 CSNK1A1LQ8N752 337 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 OR13D1Q8NGV5 346 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 SH3RF2Q8TEC5 729 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 SUSD2Q9UGT4 822 aa6.46□□□□□ -1.38
SMC1A-201ENST00000322213 DSCAMO60469 2012 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 DRGXA6NNA5 263 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 MCRIP1C9JLW8 97 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 RNGTTO60942 597 aaKnown RBP6.45□□□□□ -1.38
SMC1A-201ENST00000322213 DDAH2O95865 285 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 CD3DP04234 171 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 RNF224P0DH78 156 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 PTHLHP12272 177 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 PFN3P60673 137 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 TEAD2Q15562 447 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 FAM162BQ5T6X4 162 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 NCR3LG1Q68D85 454 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 FBRSQ9HAH7 460 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 GCM1Q9NP62 436 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 RHBDD3Q9Y3P4 386 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 SLC5A10A0PJK1 596 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 ZBTB42B2RXF5 422 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 MMP2P08253 660 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 ZNF154Q13106 437 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 C12orf73Q69YU5 71 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 CD300LDQ6UXZ3 194 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 ZNF480Q8WV37 535 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 EMG1Q92979 244 aaKnown RBP6.45□□□□□ -1.38
SMC1A-201ENST00000322213 RAB9BQ9NP90 201 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 SERTAD4Q9NUC0 356 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 MPC2O95563 127 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 IGFBP1P08833 259 aaPredicted RBP6.45□□□□□ -1.38
SMC1A-201ENST00000322213 TMEM201Q5SNT2 666 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 PTOV1Q86YD1 416 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 ZNF439Q8NDP4 499 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 NKX3-1Q99801 234 aaPredicted RBP6.45□□□□□ -1.38
SMC1A-201ENST00000322213 ZNF160Q9HCG1 818 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 PRTFDC1Q9NRG1 225 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 GKN1Q9NS71 199 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 PITPNC1Q9UKF7 332 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 TET2Q6N021 2002 aaPredicted RBP6.45□□□□□ -1.38
SMC1A-201ENST00000322213 PLCXD2Q0VAA5 305 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 CDK5R1Q15078 307 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 PLA1AQ53H76 456 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 SLC25A30Q5SVS4 291 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 C6orf132Q5T0Z8 1188 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 YOD1Q5VVQ6 348 aaPredicted RBP6.45□□□□□ -1.38
SMC1A-201ENST00000322213 OR7E24Q6IFN5 339 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 ACSM5Q6NUN0 579 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 RNF165Q6ZSG1 346 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 CMTM8Q8IZV2 173 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 AMDHD1Q96NU7 426 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 RAB18Q9NP72 206 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 MRPL22Q9NWU5 206 aaKnown RBP6.45□□□□□ -1.38
SMC1A-201ENST00000322213 NSG1A0A0A6YYJ2 146 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 ZNF840PA6NDX5 716 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 FAM74A7A6NL05 159 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 FZD6O60353 706 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 B4GALT3O60512 393 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 HTRA3P83110 453 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 FAM74A3Q4VXF1 159 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 SCAMP4Q969E2 229 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 C16orf70Q9BSU1 422 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 ZFP64Q9NPA5 681 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 A0A1W2PPQ1 181 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 FTCDNL1E5RQL4 147 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 TNFP01375 233 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 CASP6P55212 293 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 ZNF528Q3MIS6 628 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 MRM1Q6IN84 353 aaKnown RBP6.45□□□□□ -1.38
SMC1A-201ENST00000322213 GRINAQ7Z429 371 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 TEAD3Q99594 435 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 SMDT1Q9H4I9 107 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 GPR34Q9UPC5 381 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 CDRT15L2A8MXV6 281 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 ST8SIA3O43173 380 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 EDIL3O43854 480 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 GLSO94925 669 aaPredicted RBP6.45□□□□□ -1.38
SMC1A-201ENST00000322213 ABLIM3O94929 683 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 F2P00734 622 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 MGST1P10620 155 aaKnown RBP6.45□□□□□ -1.38
SMC1A-201ENST00000322213 RIPPLY2Q5TAB7 128 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 WDR5BQ86VZ2 330 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 GPX8Q8TED1 209 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 DAZLQ92904 295 aaKnown RBP6.45□□□□□ -1.38
SMC1A-201ENST00000322213 C2orf50Q96LR7 162 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 SELENOIQ9C0D9 397 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 BET1LQ9NYM9 111 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 SLC45A1Q9Y2W3 748 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 PRSS21Q9Y6M0 314 aa6.45□□□□□ -1.38
SMC1A-201ENST00000322213 ZNF860A6NHJ4 632 aa6.44□□□□□ -1.38
SMC1A-201ENST00000322213 PDGFBP01127 241 aaPredicted RBP6.44□□□□□ -1.38
SMC1A-201ENST00000322213 PPIAP62937 165 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms