RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 ZNF700Q9H0M5 742 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 ALX4Q9H161 411 aaPredicted RBP11.7□□□□□ -0.54
CPNE1-201ENST00000317677 ISG20L2Q9H9L3 353 aaKnown RBP11.7□□□□□ -0.54
CPNE1-201ENST00000317677 OPN4Q9UHM6 478 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 TMED7Q9Y3B3 224 aa11.7□□□□□ -0.54
CPNE1-201ENST00000317677 SPAARA0A1B0GVQ0 90 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 SLC22A31A6NKX4 558 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 C9J4A7 227 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 ARPC5O15511 151 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 CREBL2O60519 120 aaPredicted RBP11.69□□□□□ -0.54
CPNE1-201ENST00000317677 STK17BO94768 372 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 MT-ND4P03905 459 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 SBK2P0C263 348 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 FBXO45P0C2W1 286 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 CELP19835 753 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 CXCR1P25024 350 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 RPS18P62269 152 aaKnown RBP11.69□□□□□ -0.54
CPNE1-201ENST00000317677 DGCR2P98153 550 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 RPL18Q07020 188 aaKnown RBP11.69□□□□□ -0.54
CPNE1-201ENST00000317677 HABP2Q14520 560 aaPredicted RBP11.69□□□□□ -0.54
CPNE1-201ENST00000317677 TRIP6Q15654 476 aaKnown RBP11.69□□□□□ -0.54
CPNE1-201ENST00000317677 INPP5JQ15735 1006 aaPredicted RBP11.69□□□□□ -0.54
CPNE1-201ENST00000317677 ISXQ2M1V0 245 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 C3orf33Q6P1S2 294 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 NUP54Q7Z3B4 507 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 CBLN2Q8IUK8 224 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 MEIOBQ8N635 442 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 C10orf53Q8N6V4 93 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 OR51L1Q8NGJ5 315 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 RXFP4Q8TDU9 374 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 SMIM4Q8WVI0 70 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 CMTM3Q96MX0 182 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 NMNAT3Q96T66 252 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 DEFB126Q9BYW3 111 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 NMNAT2Q9BZQ4 307 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 SPRY4Q9C004 299 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 OR11A1Q9GZK7 315 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 RASD1Q9Y272 281 aa11.69□□□□□ -0.54
CPNE1-201ENST00000317677 ANKUB1A6NFN9 424 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 TTLL8A6PVC2 850 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 NUDT19A8MXV4 375 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 SIGLEC5O15389 551 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 IFNGP01579 166 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 F13BP05160 661 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 CDKN2AP42771 156 aaKnown RBP11.68□□□□□ -0.54
CPNE1-201ENST00000317677 POLR2HP52434 150 aaKnown RBP11.68□□□□□ -0.54
CPNE1-201ENST00000317677 E2F1Q01094 437 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 ZNF85Q03923 595 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 MPPED2Q15777 294 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 SFXN4Q6P4A7 337 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 ZNF322Q6U7Q0 402 aaPredicted RBP11.68□□□□□ -0.54
CPNE1-201ENST00000317677 SSX6Q7RTT6 188 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 GRINAQ7Z429 371 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 MISPQ8IVT2 679 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 EXD3Q8N9H8 876 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 WDSUB1Q8N9V3 476 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 C2CD4CQ8TF44 421 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 THEM6Q8WUY1 208 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 CNTNAP3BQ96NU0 1288 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 CDC6Q99741 560 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 CNTNAP3Q9BZ76 1288 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 HAO2Q9NYQ3 351 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 SIRT4Q9Y6E7 314 aaPredicted RBP11.68□□□□□ -0.54
CPNE1-201ENST00000317677 MAP1BP46821 2468 aaKnown RBP11.68□□□□□ -0.54
CPNE1-201ENST00000317677 TRAV36DV7A0A075B6V5 113 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 TRBV23-1A0A0A0MS06 115 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 CD8B2A6NJW9 211 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 SHISA8B8ZZ34 492 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 C9orf172C9J069 976 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 CD14P08571 375 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 CD8BP10966 210 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 ATP6V1E1P36543 226 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 HCCSP53701 268 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 PRPS1P60891 318 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 SMCO1Q147U7 214 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 ALG10Q5BKT4 473 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 DCAF12Q5T6F0 453 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 KRT77Q7Z794 578 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 KLHL36Q8N4N3 616 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 ACBD7Q8N6N7 88 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 THAP4Q8WY91 577 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 ZMYND19Q96E35 227 aaPredicted RBP11.68□□□□□ -0.54
CPNE1-201ENST00000317677 TMEM68Q96MH6 324 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 TSPAN32Q96QS1 320 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 FKRPQ9H9S5 495 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 PISDQ9UG56 409 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 ZMIZ1Q9ULJ6 1067 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 EPG5Q9HCE0 2579 aa11.68□□□□□ -0.54
CPNE1-201ENST00000317677 A0A0G2JK05 382 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 LOC390937A0A1W2PQ73 354 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 IL11P20809 199 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 SLC16A1P53985 500 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 AP3S2P59780 193 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 CTXN1P60606 82 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 C17orf67Q0P5P2 114 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 IL10RAQ13651 578 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 OR2B11Q5JQS5 317 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 PPP1R32Q7Z5V6 425 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 TMEM185AQ8NFB2 350 aa11.67□□□□□ -0.54
CPNE1-201ENST00000317677 TRMT10AQ8TBZ6 339 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms