RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 SEMA4FO95754 770 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 DCNP07585 359 aaKnown RBP17.09■□□□□ 0.33
RTN4-201ENST00000317610 IL13RA1P78552 427 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 C1orf61Q13536 156 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 PCK2Q16822 640 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 MARCH3Q86UD3 253 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 ZNF721Q8TF20 911 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 NARS2Q96I59 477 aaKnown RBP17.09■□□□□ 0.33
RTN4-201ENST00000317610 GPR27Q9NS67 375 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 MBD2Q9UBB5 411 aa17.09■□□□□ 0.33
RTN4-201ENST00000317610 COA3Q9Y2R0 106 aaPredicted RBP17.09■□□□□ 0.33
RTN4-201ENST00000317610 TMED7-TICAM2A0A0A6YYA0 188 aa17.08■□□□□ 0.33
RTN4-201ENST00000317610 DBX1A6NMT0 343 aa17.08■□□□□ 0.33
RTN4-201ENST00000317610 STK17BO94768 372 aa17.08■□□□□ 0.33
RTN4-201ENST00000317610 DDAH2O95865 285 aa17.08■□□□□ 0.33
RTN4-201ENST00000317610 IGHV4-34P06331 123 aa17.08■□□□□ 0.33
RTN4-201ENST00000317610 POLR2HP52434 150 aaKnown RBP17.08■□□□□ 0.33
RTN4-201ENST00000317610 TMEM244Q5VVB8 128 aa17.08■□□□□ 0.33
RTN4-201ENST00000317610 ARMC10Q8N2F6 343 aa17.08■□□□□ 0.33
RTN4-201ENST00000317610 PAQR4Q8N4S7 273 aaPredicted RBP17.08■□□□□ 0.33
RTN4-201ENST00000317610 INO80EQ8NBZ0 244 aaPredicted RBP17.08■□□□□ 0.33
RTN4-201ENST00000317610 OR5AP2Q8NGF4 316 aa17.08■□□□□ 0.33
RTN4-201ENST00000317610 CDCA3Q99618 268 aaPredicted RBP17.08■□□□□ 0.33
RTN4-201ENST00000317610 FREM3P0C091 2139 aa17.08■□□□□ 0.32
RTN4-201ENST00000317610 TRBV6-7A0A0A0MS04 114 aa17.08■□□□□ 0.32
RTN4-201ENST00000317610 A8MVM7 634 aa17.08■□□□□ 0.32
RTN4-201ENST00000317610 B4DGG1 531 aa17.08■□□□□ 0.32
RTN4-201ENST00000317610 TSPAN2O60636 221 aa17.08■□□□□ 0.32
RTN4-201ENST00000317610 LMX1BO60663 402 aa17.08■□□□□ 0.32
RTN4-201ENST00000317610 MPZL1O95297 269 aa17.08■□□□□ 0.32
RTN4-201ENST00000317610 CTSEP14091 401 aa17.08■□□□□ 0.32
RTN4-201ENST00000317610 DCAF7P61962 342 aa17.08■□□□□ 0.32
RTN4-201ENST00000317610 MRPS21P82921 87 aaKnown RBP17.08■□□□□ 0.32
RTN4-201ENST00000317610 QRFPP83859 136 aa17.08■□□□□ 0.32
RTN4-201ENST00000317610 C1orf140Q5VVS0 124 aa17.08■□□□□ 0.32
RTN4-201ENST00000317610 SLC26A10Q8NG04 563 aa17.08■□□□□ 0.32
RTN4-201ENST00000317610 ST7LQ8TDW4 575 aa17.08■□□□□ 0.32
RTN4-201ENST00000317610 FAM46BQ96A09 425 aa17.08■□□□□ 0.32
RTN4-201ENST00000317610 PIK3IP1Q96FE7 263 aa17.08■□□□□ 0.32
RTN4-201ENST00000317610 OR2AT4A6NND4 320 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 EFSO43281 561 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 DUS4LO95620 317 aaKnown RBP17.07■□□□□ 0.32
RTN4-201ENST00000317610 IL12BP29460 328 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 AVPR2P30518 371 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 CAPZBP47756 277 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 UNC119Q13432 240 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 C10orf91Q5T1B1 145 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.07■□□□□ 0.32
RTN4-201ENST00000317610 FAM109BQ6ICB4 259 aaPredicted RBP17.07■□□□□ 0.32
RTN4-201ENST00000317610 DEGS2Q6QHC5 323 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 PUSL1Q8N0Z8 303 aaKnown RBP17.07■□□□□ 0.32
RTN4-201ENST00000317610 SVBPQ8N300 66 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 TSNAXQ99598 290 aaKnown RBP17.07■□□□□ 0.32
RTN4-201ENST00000317610 CNTD2Q9H8S5 307 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 TMEM100Q9NV29 134 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 SLC39A1Q9NY26 324 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 IGKV3D-11A0A0A0MRZ8 115 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 TO15178 435 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 CRHP06850 196 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 TBPP20226 339 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 HSD11B1P28845 292 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 SLC26A5P58743 744 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 HFEQ30201 348 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 GVQW1Q8N7I0 195 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 DTWD2Q8NBA8 298 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 NUDT16L1Q9BRJ7 211 aaKnown RBP17.07■□□□□ 0.32
RTN4-201ENST00000317610 ASF1BQ9NVP2 202 aa17.07■□□□□ 0.32
RTN4-201ENST00000317610 TEX13DA0A0J9YY54 714 aaPredicted RBP17.06■□□□□ 0.32
RTN4-201ENST00000317610 TMEM150CB9EJG8 249 aa17.06■□□□□ 0.32
RTN4-201ENST00000317610 GPR31O00270 319 aa17.06■□□□□ 0.32
RTN4-201ENST00000317610 NUDT14O95848 222 aa17.06■□□□□ 0.32
RTN4-201ENST00000317610 CD79AP11912 226 aa17.06■□□□□ 0.32
RTN4-201ENST00000317610 ADCYAP1P18509 176 aa17.06■□□□□ 0.32
RTN4-201ENST00000317610 CTAG1AP78358 180 aa17.06■□□□□ 0.32
RTN4-201ENST00000317610 NAAAQ02083 359 aa17.06■□□□□ 0.32
RTN4-201ENST00000317610 EBPQ15125 230 aaKnown RBP17.06■□□□□ 0.32
RTN4-201ENST00000317610 PNLIPRP3Q17RR3 467 aa17.06■□□□□ 0.32
RTN4-201ENST00000317610 SHEQ5VZ18 495 aa17.06■□□□□ 0.32
RTN4-201ENST00000317610 RHOUQ7L0Q8 258 aa17.06■□□□□ 0.32
RTN4-201ENST00000317610 SLC30A7Q8NEW0 376 aa17.06■□□□□ 0.32
RTN4-201ENST00000317610 TSLPQ969D9 159 aa17.06■□□□□ 0.32
RTN4-201ENST00000317610 CMBLQ96DG6 245 aa17.06■□□□□ 0.32
RTN4-201ENST00000317610 GAL3ST4Q96RP7 486 aa17.06■□□□□ 0.32
RTN4-201ENST00000317610 MTIF3Q9H2K0 278 aaKnown RBP17.06■□□□□ 0.32
RTN4-201ENST00000317610 MKL2Q9ULH7 1088 aa17.06■□□□□ 0.32
RTN4-201ENST00000317610 PCNX3Q9H6A9 2034 aa17.06■□□□□ 0.32
RTN4-201ENST00000317610 FAM25EA8MYX2 175 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 LINC01565O15544 149 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 ZNF208O43345 1280 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 BPNT1O95861 308 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 ERCC1P07992 297 aaPredicted RBP17.05■□□□□ 0.32
RTN4-201ENST00000317610 GABRG2P18507 467 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 PSMB6P28072 239 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 GSK3AP49840 483 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 OR52W1Q6IF63 320 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 DCXRQ7Z4W1 244 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 LDLRAD3Q86YD5 345 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 ADAD2Q8NCV1 583 aaKnown RBP17.05■□□□□ 0.32
RTN4-201ENST00000317610 NKD1Q969G9 470 aa17.05■□□□□ 0.32
RTN4-201ENST00000317610 FN3KRPQ9HA64 309 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms