RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 PDZD9Q8IXQ8 264 aa5.56□□□□□ -1.52
PRKDC-201ENST00000314191 SYT3Q9BQG1 590 aa5.56□□□□□ -1.52
PRKDC-201ENST00000314191 KCNK15Q9H427 330 aa5.56□□□□□ -1.52
PRKDC-201ENST00000314191 LSM5Q9Y4Y9 91 aaKnown RBP5.56□□□□□ -1.52
PRKDC-201ENST00000314191 OGG1O15527 345 aa5.56□□□□□ -1.52
PRKDC-201ENST00000314191 TNFSF15O95150 251 aa5.56□□□□□ -1.52
PRKDC-201ENST00000314191 OPCMLQ14982 345 aa5.56□□□□□ -1.52
PRKDC-201ENST00000314191 PPA1Q15181 289 aa5.56□□□□□ -1.52
PRKDC-201ENST00000314191 GPR84Q9NQS5 396 aa5.56□□□□□ -1.52
PRKDC-201ENST00000314191 RAB22AQ9UL26 194 aa5.56□□□□□ -1.52
PRKDC-201ENST00000314191 KCNS2Q9ULS6 477 aa5.56□□□□□ -1.52
PRKDC-201ENST00000314191 D6RAR5 112 aa5.56□□□□□ -1.52
PRKDC-201ENST00000314191 KLRC4-KLRK1H3BQV0 150 aa5.56□□□□□ -1.52
PRKDC-201ENST00000314191 CBR3O75828 277 aa5.56□□□□□ -1.52
PRKDC-201ENST00000314191 CHRM2P08172 466 aa5.56□□□□□ -1.52
PRKDC-201ENST00000314191 FZD5Q13467 585 aa5.56□□□□□ -1.52
PRKDC-201ENST00000314191 BEND4Q6ZU67 534 aa5.56□□□□□ -1.52
PRKDC-201ENST00000314191 VASH2Q86V25 355 aa5.56□□□□□ -1.52
PRKDC-201ENST00000314191 NECAB3Q96P71 396 aaPredicted RBP5.56□□□□□ -1.52
PRKDC-201ENST00000314191 GDF2Q9UK05 429 aaPredicted RBP5.56□□□□□ -1.52
PRKDC-201ENST00000314191 IGHV3-64DA0A0J9YX35 117 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 ABHD16AO95870 558 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 TRAPPC2P0DI81 140 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 TRAPPC2BP0DI82 140 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 DYRK1AQ13627 763 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 CDK10Q15131 360 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 DUSP15Q9H1R2 295 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-201ENST00000314191 C12orf4Q9NQ89 552 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 PMP2P02689 132 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 NGFRP08138 427 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 BPHLQ86WA6 291 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-201ENST00000314191 CDC20BQ86Y33 519 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 SULF2Q8IWU5 870 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 NKAIN3Q8N8D7 197 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 SGCZQ96LD1 299 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 PLA2G10O15496 165 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 DIRAS3O95661 229 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 MT-CO3P00414 261 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 C1QBP02746 253 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 ATF4P18848 351 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-201ENST00000314191 SLC25A1P53007 311 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 LINC00303Q3SY05 128 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 FIP1L1Q6UN15 594 aaKnown RBP5.55□□□□□ -1.52
PRKDC-201ENST00000314191 AKR7LQ8NHP1 331 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 CPT1CQ8TCG5 803 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 SMIM4Q8WVI0 70 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 APOBEC4Q8WW27 367 aaKnown RBP5.55□□□□□ -1.52
PRKDC-201ENST00000314191 BRWD1Q9NSI6 2320 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 HLA-DOBP13765 273 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 EDN3P14138 238 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 RIPPLY1Q0D2K3 151 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 SPEM2Q0P670 501 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 ZMYND11Q15326 602 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 CCDC28AQ8IWP9 274 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 LILRB4Q8NHJ6 448 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 AMELYQ99218 206 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 PIGLQ9Y2B2 252 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 RECKO95980 971 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 SEMA6DQ8NFY4 1073 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 VOPP1Q96AW1 172 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 PTDSS2Q9BVG9 487 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 KLHDC2Q9Y2U9 406 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 NACAE9PAV3 2078 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 ANKRD30BLA7E2S9 258 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 TIGD3Q6B0B8 471 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 EIF5AL1Q6IS14 154 aaKnown RBP5.55□□□□□ -1.52
PRKDC-201ENST00000314191 UPRTQ96BW1 309 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 OR5V1Q9UGF6 321 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 SF3B6Q9Y3B4 125 aaKnown RBP5.55□□□□□ -1.52
PRKDC-201ENST00000314191 A0A096LPE4 126 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 A0A1W2PPZ6 126 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 GAAP10253 952 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 LIX1LQ8IVB5 337 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 OR52B4Q8NGK2 314 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 OR2V1Q8NHB1 315 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 HRGP04196 525 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 GALNSP34059 522 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 CYCSP99999 105 aaKnown RBP5.55□□□□□ -1.52
PRKDC-201ENST00000314191 ZNF684Q5T5D7 378 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 C3P1Q6ZMU1 363 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 SH3BGRL2Q9UJC5 107 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 PRELID1Q9Y255 219 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 FER1L6Q2WGJ9 1857 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 FAM221AA4D161 298 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 TOX3O15405 576 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-201ENST00000314191 CNOT4O95628 575 aaKnown RBP5.55□□□□□ -1.52
PRKDC-201ENST00000314191 CSF2RBP32927 897 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 RAP2BP61225 183 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 ZNF546Q86UE3 836 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 CCDC54Q8NEL0 328 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 A0A1W2PQM1 296 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 TMEM221A6NGB7 291 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 SLC33A1O00400 549 aaPredicted RBP5.55□□□□□ -1.52
PRKDC-201ENST00000314191 GRB2P62993 217 aaKnown RBP5.55□□□□□ -1.52
PRKDC-201ENST00000314191 TRA2AQ13595 282 aaKnown RBP eCLIP5.55□□□□□ -1.52
PRKDC-201ENST00000314191 NAXDQ8IW45 347 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 C1QTNF6Q9BXI9 259 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 RAB33BQ9H082 229 aa5.55□□□□□ -1.52
PRKDC-201ENST00000314191 UCK1Q9HA47 277 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms