RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 NOX3Q9HBY0 568 aa12.27□□□□□ -0.44
DDX54-202ENST00000314045 DYNLRB1Q9NP97 96 aa12.27□□□□□ -0.44
DDX54-202ENST00000314045 RBFOX1Q9NWB1 397 aaKnown RBP12.27□□□□□ -0.44
DDX54-202ENST00000314045 UGT2A1Q9Y4X1 527 aa12.27□□□□□ -0.44
DDX54-202ENST00000314045 A0A0G2JMP0 313 aa12.27□□□□□ -0.45
DDX54-202ENST00000314045 RAC3P60763 192 aa12.27□□□□□ -0.45
DDX54-202ENST00000314045 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.27□□□□□ -0.45
DDX54-202ENST00000314045 TRAPPC6BQ86SZ2 158 aa12.27□□□□□ -0.45
DDX54-202ENST00000314045 BEST4Q8NFU0 473 aa12.27□□□□□ -0.45
DDX54-202ENST00000314045 OR4M2Q8NGB6 313 aa12.27□□□□□ -0.45
DDX54-202ENST00000314045 HS3ST3B1Q9Y662 390 aa12.27□□□□□ -0.45
DDX54-202ENST00000314045 TNFRSF10AO00220 468 aa12.27□□□□□ -0.45
DDX54-202ENST00000314045 IFI6P09912 130 aa12.27□□□□□ -0.45
DDX54-202ENST00000314045 LIPCP11150 499 aa12.27□□□□□ -0.45
DDX54-202ENST00000314045 ELK1P19419 428 aa12.27□□□□□ -0.45
DDX54-202ENST00000314045 AKIRIN2Q53H80 203 aa12.27□□□□□ -0.45
DDX54-202ENST00000314045 FHL5Q5TD97 284 aa12.27□□□□□ -0.45
DDX54-202ENST00000314045 RTL6Q6ICC9 239 aa12.27□□□□□ -0.45
DDX54-202ENST00000314045 SNAPC3Q92966 411 aa12.27□□□□□ -0.45
DDX54-202ENST00000314045 JAM3Q9BX67 310 aa12.27□□□□□ -0.45
DDX54-202ENST00000314045 OR51J1Q9H342 316 aa12.27□□□□□ -0.45
DDX54-202ENST00000314045 GPR173Q9NS66 373 aa12.27□□□□□ -0.45
DDX54-202ENST00000314045 C5orf49A4QMS7 147 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 TSPAN2O60636 221 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 PRAF2O60831 178 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 SLC34A2O95436 690 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 IFNA7P01567 189 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 ZNF121P58317 390 aaPredicted RBP12.26□□□□□ -0.45
DDX54-202ENST00000314045 DOC2BQ14184 412 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 CEBPEQ15744 281 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 EIF5AL1Q6IS14 154 aaKnown RBP12.26□□□□□ -0.45
DDX54-202ENST00000314045 PRSS45Q7RTY3 260 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 PRSS27Q9BQR3 290 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 RANBP3Q9H6Z4 567 aaPredicted RBP12.26□□□□□ -0.45
DDX54-202ENST00000314045 KCNE5Q9UJ90 142 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 PROCRQ9UNN8 238 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 LRP12Q9Y561 859 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 HEATR5BQ9P2D3 2071 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 LIPT2A6NK58 231 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 IFITM5A6NNB3 132 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 SLC22A5O76082 557 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 CRYABP02511 175 aaKnown RBP12.26□□□□□ -0.45
DDX54-202ENST00000314045 UBBP0CG47 229 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 ARR3P36575 388 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 MLF1P58340 268 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 MGAT2Q10469 447 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 TATDN3Q17R31 274 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 ELFN2Q5R3F8 820 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 CFAP77Q6ZQR2 320 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 GTPBP8Q8N3Z3 284 aaPredicted RBP12.26□□□□□ -0.45
DDX54-202ENST00000314045 CHPT1Q8WUD6 406 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 RNF170Q96K19 258 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 SLCO5A1Q9H2Y9 848 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 ZCCHC4Q9H5U6 513 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 EXOGQ9Y2C4 368 aaKnown RBP12.26□□□□□ -0.45
DDX54-202ENST00000314045 GMEB1Q9Y692 573 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 ATRXP46100 2492 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 RAB2AP61019 212 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 IKZF1Q13422 519 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 STAC2Q6ZMT1 411 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 OR2M3Q8NG83 312 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 IL1F10Q8WWZ1 152 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 SPSB2Q99619 263 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 BANF2Q9H503 90 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 TRAPPC4Q9Y296 219 aa12.26□□□□□ -0.45
DDX54-202ENST00000314045 NLRC5Q86WI3 1866 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 AIPO00170 330 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 ZNF806P0C7X5 589 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 PSMB1P20618 241 aaKnown RBP12.25□□□□□ -0.45
DDX54-202ENST00000314045 IGLV3-21P80748 117 aaPredicted RBP12.25□□□□□ -0.45
DDX54-202ENST00000314045 PMPCAQ10713 525 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 PSD2Q9BQI7 771 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 EHFQ9NZC4 300 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 MCRIP1C9JLW8 97 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 ZFPL1O95159 310 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 CALCBP10092 127 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 DBPQ10586 325 aaPredicted RBP12.25□□□□□ -0.45
DDX54-202ENST00000314045 TNK1Q13470 666 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 GRK1Q15835 563 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 ETFDHQ16134 617 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 SSX1Q16384 188 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 CCDC71Q8IV32 467 aaPredicted RBP12.25□□□□□ -0.45
DDX54-202ENST00000314045 LYSMD2Q8IV50 215 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 NPEPL1Q8NDH3 523 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 MCHR2Q969V1 340 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 MTCL1Q9Y4B5 1905 aaKnown RBP12.25□□□□□ -0.45
DDX54-202ENST00000314045 A0A0B4J203 849 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 TO15178 435 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 NGFRP08138 427 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 CHRM2P08172 466 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 PCMT1P22061 227 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 CD82P27701 267 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 AGAP6Q5VW22 663 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 ASCC1Q8N9N2 400 aaKnown RBP12.25□□□□□ -0.45
DDX54-202ENST00000314045 ZBTB8BQ8NAP8 495 aaPredicted RBP12.25□□□□□ -0.45
DDX54-202ENST00000314045 C11orf54Q9H0W9 315 aaPredicted RBP12.25□□□□□ -0.45
DDX54-202ENST00000314045 COQ3Q9NZJ6 369 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 RER1O15258 196 aa12.25□□□□□ -0.45
DDX54-202ENST00000314045 ZNF780AO75290 641 aaPredicted RBP12.25□□□□□ -0.45
DDX54-202ENST00000314045 FGF9P31371 208 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms