RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 GNRHR2Q96P88 292 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 C12orf49Q9H741 205 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 TIMM10BQ9Y5J6 103 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 NYNRINQ9P2P1 1898 aaKnown RBP10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 DOCK6Q96HP0 2047 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 TNFSF11O14788 317 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 ATF1P18846 271 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 HOXD12P35452 270 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 CAV2P51636 162 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 IRF3Q14653 427 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 RNLSQ5VYX0 342 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 COMMD7Q86VX2 200 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZNF768Q9H5H4 540 aaKnown RBP10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 HAO2Q9NYQ3 351 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 DNAJB11Q9UBS4 358 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 CCDC187A0A096LP49 1063 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 TCRBV16S1A1N1A0A5B0 115 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 TMEM235A6NFC5 223 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 M0R036 132 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 RFC3P40938 356 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 CLDN15P56746 228 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 FMODQ06828 376 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 DYRK1AQ13627 763 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZNF770Q6IQ21 691 aaPredicted RBP10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZNF709Q8N972 641 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 LRRC46Q96FV0 321 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 SEC22AQ96IW7 307 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 RNF170Q96K19 258 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 NUP50Q9UKX7 468 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 LHX6Q9UPM6 363 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 LRP12Q9Y561 859 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 PLSCR5A0PG75 271 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 MCRIP1C9JLW8 97 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 SMLR1H3BR10 107 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 TMEM127O75204 238 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 IKZF1Q13422 519 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 SLC10A1Q14973 349 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 OR10K2Q6IF99 312 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 OR5H6Q8NGV6 325 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 ARL5BQ96KC2 179 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 SMOC1Q9H4F8 434 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 P4HTMQ9NXG6 502 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 MLXQ9UH92 298 aa10.29□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZSWIM8A7E2V4 1837 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 ANXA7P20073 488 aaKnown RBP10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZNF616Q08AN1 781 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 FUT5Q11128 374 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 C1QL3Q5VWW1 255 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 DGAT2L6Q6ZPD8 337 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 NOXO1Q8NFA2 376 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 OR9K2Q8NGE7 335 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 A0A1W2PQD3 144 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 PMS2P2O95744 297 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 PMP2P02689 132 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 COL13A1Q5TAT6 717 aaPredicted RBP10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 TSNAXQ99598 290 aaKnown RBP10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 DEFB127Q9H1M4 99 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 AUNIPQ9H7T9 357 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 GPR173Q9NS66 373 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZNF223Q9UK11 482 aaPredicted RBP10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 ICAM5Q9UMF0 924 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 CACNA1EQ15878 2313 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 GPANK1O95872 356 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 WNT1P04628 370 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 TGM1P22735 817 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 NFYAP23511 347 aaPredicted RBP10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 CDAP32320 146 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 POU4F3Q15319 338 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 SHBQ15464 509 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 CDONQ4KMG0 1287 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZNF585AQ6P3V2 769 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 OR52H1Q8NGJ2 320 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 OR1J2Q8NGS2 313 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 SMIM4Q8WVI0 70 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 INTS12Q96CB8 462 aaKnown RBP10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 MUCL1Q96DR8 90 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 C4orf45Q96LM5 186 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 AIFM2Q9BRQ8 373 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 OCIAD1Q9NX40 245 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 FBXL2Q9UKC9 423 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 SLC22A23A1A5C7 686 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 IGHA1P01876 353 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 CD79BP40259 229 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 WDR38Q5JTN6 314 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 VWCEQ96DN2 955 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZNF436Q9C0F3 470 aaPredicted RBP10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 HRASLSQ9HDD0 168 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 GLTPQ9NZD2 209 aa10.28□□□□□ -0.76
PCDHGC3-201ENST00000308177 D6RAR5 112 aa10.27□□□□□ -0.76
PCDHGC3-201ENST00000308177 ATG12O94817 140 aa10.27□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZNF806P0C7X5 589 aa10.27□□□□□ -0.76
PCDHGC3-201ENST00000308177 RBP2P50120 134 aa10.27□□□□□ -0.76
PCDHGC3-201ENST00000308177 MZT1Q08AG7 82 aa10.27□□□□□ -0.76
PCDHGC3-201ENST00000308177 SKP2Q13309 424 aa10.27□□□□□ -0.76
PCDHGC3-201ENST00000308177 BCL2A1Q16548 175 aa10.27□□□□□ -0.76
PCDHGC3-201ENST00000308177 PCDHGA5Q9Y5G8 931 aa10.27□□□□□ -0.76
PCDHGC3-201ENST00000308177 CHD5Q8TDI0 1954 aa10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 SLC17A2O00624 439 aa10.27□□□□□ -0.77
PCDHGC3-201ENST00000308177 BET1O15155 118 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms