RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 CLPXO76031 633 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 H2BFMP0C1H6 154 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 FCGR2AP12318 317 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 HIST1H3AP68431 136 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 MXD1Q05195 221 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 DGUOKQ16854 277 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 ODF4Q2M2E3 257 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 ACSF3Q4G176 576 aaPredicted RBP6.11□□□□□ -1.43
PTCD2-201ENST00000308077 ACSM3Q53FZ2 586 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 CCDC92Q53HC0 331 aaPredicted RBP6.11□□□□□ -1.43
PTCD2-201ENST00000308077 HIST2H3PS2Q5TEC6 136 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 FAM27BQ5VT28 67 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 DEGS2Q6QHC5 323 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 KLHL24Q6TFL4 600 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 FAM180AQ6UWF9 173 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 UNQ9370/PRO34162Q6UXP9 181 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 HIST2H3AQ71DI3 136 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 P4HA3Q7Z4N8 544 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 CEACAM19Q7Z692 300 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 BTLAQ7Z6A9 289 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 RDH10Q8IZV5 341 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 GCNT2Q8N0V5 402 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 MS4A15Q8N5U1 240 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 C9orf106Q8NAJ2 232 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 OR10AC1Q8NH08 325 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 OR5AK2Q8NH90 309 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 FGFBP3Q8TAT2 258 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 HAVCR2Q8TDQ0 301 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 APH1AQ96BI3 265 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 GMPPAQ96IJ6 420 aaPredicted RBP6.11□□□□□ -1.43
PTCD2-201ENST00000308077 OR14A2Q96R54 314 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 C12orf49Q9H741 205 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 SIAEQ9HAT2 523 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 GP6Q9HCN6 339 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 G6PC2Q9NQR9 355 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 SNTG1Q9NSN8 517 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 GSTK1Q9Y2Q3 226 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 R4GMQ9 66 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 NBEAL1Q6ZS30 2694 aa6.11□□□□□ -1.43
PTCD2-201ENST00000308077 TRBV5-5A0A0J9YX44 114 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 ZNF878C9JN71 531 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 H3BSH0 61 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 J3QRK9 145 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 GPRIN2O60269 458 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 DOK2O60496 412 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 ZNF254O75437 659 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 KRT33AO76009 404 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 IL1AP01583 271 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 CST2P09228 141 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 PATE4P0C8F1 98 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 NPR2P20594 1047 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 CALRP27797 417 aaKnown RBP6.1□□□□□ -1.43
PTCD2-201ENST00000308077 GUCA1AP43080 201 aaPredicted RBP6.1□□□□□ -1.43
PTCD2-201ENST00000308077 CCR9P51686 369 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 BMXP51813 675 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 TDGF1P3P51864 188 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 CAV3P56539 151 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 PRR30Q53SZ7 412 aaPredicted RBP6.1□□□□□ -1.43
PTCD2-201ENST00000308077 ZMAT1Q5H9K5 638 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 C9orf135Q5VTT2 229 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 RTL6Q6ICC9 239 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 ZNF585AQ6P3V2 769 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 SEM1Q6ZVN7 128 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 NR2C2APQ86WQ0 139 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 ZNF100Q8IYN0 542 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 SLC22A24Q8N4F4 322 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 CISD2Q8N5K1 135 aaKnown RBP6.1□□□□□ -1.43
PTCD2-201ENST00000308077 OR51A4Q8NGJ6 313 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 ORAI1Q96D31 301 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 MED18Q9BUE0 208 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 NXF2Q9GZY0 626 aaKnown RBP6.1□□□□□ -1.43
PTCD2-201ENST00000308077 TPK1Q9H3S4 243 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 FAM206AQ9NX38 181 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 GTF2A1LQ9UNN4 478 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 EMC9Q9Y3B6 208 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 USP9YO00507 2555 aaPredicted RBP6.1□□□□□ -1.43
PTCD2-201ENST00000308077 ITPR2Q14571 2701 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 A0A1W2PPK0 400 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 OR6C65A6NJZ3 312 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 ACOD1A6NK06 481 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 TMEM212A6NML5 194 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 AHRRA9YTQ3 701 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 ZNF587BE7ETH6 402 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 PIN1P1O15428 100 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 NCR1O76036 304 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 UCHL1P09936 223 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 DCTDP32321 178 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 OR3A2P47893 321 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 ARF1P84077 181 aaKnown RBP6.1□□□□□ -1.43
PTCD2-201ENST00000308077 FAPQ12884 760 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 HNRNPA0Q13151 305 aaKnown RBP6.1□□□□□ -1.43
PTCD2-201ENST00000308077 STK11Q15831 433 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 RSPO1Q2MKA7 263 aaPredicted RBP6.1□□□□□ -1.43
PTCD2-201ENST00000308077 ZNF404Q494X3 552 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 YIF1BQ5BJH7 314 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 NSUN5P2Q63ZY6 315 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 ZNF813Q6ZN06 617 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 RHOUQ7L0Q8 258 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.1□□□□□ -1.43
PTCD2-201ENST00000308077 SKA3Q8IX90 412 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms