RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 MYO7BQ6PIF6 2116 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 FOXRED1Q96CU9 486 aaPredicted RBP13.12□□□□□ -0.31
PTPN9-201ENST00000306726 TOE1Q96GM8 510 aaKnown RBP13.12□□□□□ -0.31
PTPN9-201ENST00000306726 PTGES2Q9H7Z7 377 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 CPED1A4D0V7 1026 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 MFSD2BA6NFX1 497 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 TMEM150CB9EJG8 249 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 H7C417 338 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 ZNF264O43296 627 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 SYT7O43581 403 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 SRPX2O60687 465 aaPredicted RBP13.12□□□□□ -0.31
PTPN9-201ENST00000306726 SEMA4FO95754 770 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 CSF2RBP32927 897 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 SGCAQ16586 387 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 MESTQ5EB52 335 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 PAPD4Q6PIY7 484 aaKnown RBP13.12□□□□□ -0.31
PTPN9-201ENST00000306726 Q6ZS52 159 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 HGDQ93099 445 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 TSPAN32Q96QS1 320 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 G6PC3Q9BUM1 346 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 MTFP1Q9UDX5 166 aa13.12□□□□□ -0.31
PTPN9-201ENST00000306726 G3V3Q6 166 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 TBX19O60806 448 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 MED6O75586 246 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 AHSA1O95433 338 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 ABOP16442 354 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 OMGP23515 440 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 SLC16A9Q7RTY1 509 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 MRGPREQ86SM8 312 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 OR2I1PQ8NGU4 316 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 MRPS24Q96EL2 167 aaKnown RBP13.11□□□□□ -0.31
PTPN9-201ENST00000306726 WDR77Q9BQA1 342 aaPredicted RBP13.11□□□□□ -0.31
PTPN9-201ENST00000306726 TMPRSS13Q9BYE2 586 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 PRMT8Q9NR22 394 aaPredicted RBP13.11□□□□□ -0.31
PTPN9-201ENST00000306726 PRODH2Q9UF12 536 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 SLCO1B1Q9Y6L6 691 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 URGCP-MRPS24S4R325 110 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 LOC107986453A0A1B0GWG9 222 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 CLDN6P56747 220 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 TAS2R19P59542 299 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 ACTBP60709 375 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 ACTG1P63261 375 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 PLAURQ03405 335 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 KIR2DS3Q14952 304 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 KIAA0895LQ68EN5 471 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 ADAM5Q6NVV9 412 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 CCDC36Q8IYA8 594 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 BHLHE23Q8NDY6 225 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 ANKRD9Q96BM1 317 aaPredicted RBP13.11□□□□□ -0.31
PTPN9-201ENST00000306726 MRPS18BQ9Y676 258 aaKnown RBP13.11□□□□□ -0.31
PTPN9-201ENST00000306726 EP300Q09472 2414 aaPredicted RBP13.11□□□□□ -0.31
PTPN9-201ENST00000306726 LAMTOR5O43504 91 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 XRCC3O43542 346 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 TNFP01375 233 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 EMP2P54851 167 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 ACSM1Q08AH1 577 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 ANGPTL5Q86XS5 388 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 SYS1Q8N2H4 156 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 PRSS35Q8N3Z0 413 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 OR52H1Q8NGJ2 320 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 ZC3H10Q96K80 434 aaKnown RBP13.11□□□□□ -0.31
PTPN9-201ENST00000306726 SARGQ9BW04 601 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 HS3ST3A1Q9Y663 406 aa13.11□□□□□ -0.31
PTPN9-201ENST00000306726 PTPRZ1P23471 2315 aaPredicted RBP13.1□□□□□ -0.31
PTPN9-201ENST00000306726 PRTGQ2VWP7 1150 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 P4HA3Q7Z4N8 544 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 WDR5BQ86VZ2 330 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 ESX1Q8N693 406 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 PHB2Q99623 299 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 ABHD6Q9BV23 337 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 SEMA6CQ9H3T2 930 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 A0A087WUJ7 227 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 LOC100289279A0A1B0GTE1 492 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 FAM221BA6H8Z2 402 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 TGFBR3LH3BV60 316 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 UBBP0CG47 229 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 UBCP0CG48 685 aaKnown RBP13.1□□□□□ -0.31
PTPN9-201ENST00000306726 AMY2BP19961 511 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 GABRR1P24046 479 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 KCTD18Q6PI47 426 aaPredicted RBP13.1□□□□□ -0.31
PTPN9-201ENST00000306726 OR5M9Q8NGP3 310 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 C14orf79Q96F83 325 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 BMFQ96LC9 184 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 TRAV20A0A0B4J274 112 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 CYR61O00622 381 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 ZNF14P17017 642 aaPredicted RBP13.1□□□□□ -0.31
PTPN9-201ENST00000306726 CTRB1P17538 263 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 SERPINA2P20848 420 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 CD96P40200 585 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 SNRPEP62304 92 aaKnown RBP13.1□□□□□ -0.31
PTPN9-201ENST00000306726 YPEL5P62699 121 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 SP6Q3SY56 376 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 ATPAF1Q5TC12 328 aaPredicted RBP13.1□□□□□ -0.31
PTPN9-201ENST00000306726 CTRB2Q6GPI1 263 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 PUSL1Q8N0Z8 303 aaKnown RBP13.1□□□□□ -0.31
PTPN9-201ENST00000306726 CLRN3Q8NCR9 226 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 SLAMF9Q96A28 289 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 PNPLA2Q96AD5 504 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 NICN1Q9BSH3 213 aa13.1□□□□□ -0.31
PTPN9-201ENST00000306726 FANCFQ9NPI8 374 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms