RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 ODF4Q2M2E3 257 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 CCDC92Q53HC0 331 aaPredicted RBP15.38■□□□□ 0.05
KRT28-201ENST00000306658 BCL2L15Q5TBC7 163 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 C9orf106Q8NAJ2 232 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 RGP1Q92546 391 aaPredicted RBP15.38■□□□□ 0.05
KRT28-201ENST00000306658 KCNJ15Q99712 375 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 HDHD2Q9H0R4 259 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 PPIL3Q9H2H8 161 aaKnown RBP15.38■□□□□ 0.05
KRT28-201ENST00000306658 G6PC2Q9NQR9 355 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 FAM206AQ9NX38 181 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 PRSS50Q9UI38 385 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 TRAV1-2A0A0B4J238 106 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 TRBV5-5A0A0J9YX44 114 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 ISG15P05161 165 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 ABOP16442 354 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 MPGP29372 298 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 PEX19P40855 299 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 GALK2Q01415 458 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 ECH1Q13011 328 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 RAB35Q15286 201 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 HSD17B12Q53GQ0 312 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 FAM27D1Q5T7N8 215 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 TMEM244Q5VVB8 128 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 SKA3Q8IX90 412 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 RDH10Q8IZV5 341 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 FAM57AQ8TBR7 257 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 NXF2Q9GZY0 626 aaKnown RBP15.38■□□□□ 0.05
KRT28-201ENST00000306658 BRD7Q9NPI1 651 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 ARHGAP21Q5T5U3 1957 aa15.38■□□□□ 0.05
KRT28-201ENST00000306658 DOCK7Q96N67 2140 aa15.37■□□□□ 0.05
KRT28-201ENST00000306658 ATMQ13315 3056 aa15.37■□□□□ 0.05
KRT28-201ENST00000306658 MBD3L4A6NDZ8 208 aaPredicted RBP15.37■□□□□ 0.05
KRT28-201ENST00000306658 MBD3L3A6NE82 208 aaPredicted RBP15.37■□□□□ 0.05
KRT28-201ENST00000306658 MBD3L5A6NJ08 208 aaPredicted RBP15.37■□□□□ 0.05
KRT28-201ENST00000306658 RAF1P04049 648 aa15.37■□□□□ 0.05
KRT28-201ENST00000306658 CLEC2LP0C7M8 214 aa15.37■□□□□ 0.05
KRT28-201ENST00000306658 UBCP0CG48 685 aaKnown RBP15.37■□□□□ 0.05
KRT28-201ENST00000306658 ZNF32P17041 273 aa15.37■□□□□ 0.05
KRT28-201ENST00000306658 PRKXP51817 358 aa15.37■□□□□ 0.05
KRT28-201ENST00000306658 PER3P56645 1201 aa15.37■□□□□ 0.05
KRT28-201ENST00000306658 HNRNPA0Q13151 305 aaKnown RBP15.37■□□□□ 0.05
KRT28-201ENST00000306658 MOGQ16653 247 aa15.37■□□□□ 0.05
KRT28-201ENST00000306658 SLC36A2Q495M3 483 aa15.37■□□□□ 0.05
KRT28-201ENST00000306658 C9orf135Q5VTT2 229 aa15.37■□□□□ 0.05
KRT28-201ENST00000306658 ZNF283Q8N7M2 679 aa15.37■□□□□ 0.05
KRT28-201ENST00000306658 CNEP1R1Q8N9A8 125 aa15.37■□□□□ 0.05
KRT28-201ENST00000306658 OR6K3Q8NGY3 331 aa15.37■□□□□ 0.05
KRT28-201ENST00000306658 MBD3L2Q8NHZ7 208 aaPredicted RBP15.37■□□□□ 0.05
KRT28-201ENST00000306658 SPTSSAQ969W0 71 aa15.37■□□□□ 0.05
KRT28-201ENST00000306658 PPP1R14AQ96A00 147 aa15.37■□□□□ 0.05
KRT28-201ENST00000306658 BARHL1Q9BZE3 327 aa15.37■□□□□ 0.05
KRT28-201ENST00000306658 C6orf62Q9GZU0 229 aaPredicted RBP15.37■□□□□ 0.05
KRT28-201ENST00000306658 PBOV1Q9GZY1 135 aa15.37■□□□□ 0.05
KRT28-201ENST00000306658 NOX4Q9NPH5 578 aa15.37■□□□□ 0.05
KRT28-201ENST00000306658 A0A075B6Q4 140 aa15.36■□□□□ 0.05
KRT28-201ENST00000306658 A0A1W2PPK0 400 aa15.36■□□□□ 0.05
KRT28-201ENST00000306658 SHISA3A0PJX4 238 aa15.36■□□□□ 0.05
KRT28-201ENST00000306658 ACOD1A6NK06 481 aa15.36■□□□□ 0.05
KRT28-201ENST00000306658 CNOT4O95628 575 aaKnown RBP15.36■□□□□ 0.05
KRT28-201ENST00000306658 CX3CR1P49238 355 aa15.36■□□□□ 0.05
KRT28-201ENST00000306658 TDGF1P3P51864 188 aa15.36■□□□□ 0.05
KRT28-201ENST00000306658 EIF2S3LQ2VIR3 472 aaKnown RBP15.36■□□□□ 0.05
KRT28-201ENST00000306658 C1orf185Q5T7R7 199 aa15.36■□□□□ 0.05
KRT28-201ENST00000306658 TFAP2EQ6VUC0 442 aa15.36■□□□□ 0.05
KRT28-201ENST00000306658 CD163Q86VB7 1156 aa15.36■□□□□ 0.05
KRT28-201ENST00000306658 ELMOD2Q8IZ81 293 aa15.36■□□□□ 0.05
KRT28-201ENST00000306658 TSEN15Q8WW01 171 aaKnown RBP15.36■□□□□ 0.05
KRT28-201ENST00000306658 AP3S1Q92572 193 aa15.36■□□□□ 0.05
KRT28-201ENST00000306658 SNRNP40Q96DI7 357 aaKnown RBP15.36■□□□□ 0.05
KRT28-201ENST00000306658 DERL3Q96Q80 235 aa15.36■□□□□ 0.05
KRT28-201ENST00000306658 SLX1AQ9BQ83 275 aa15.36■□□□□ 0.05
KRT28-201ENST00000306658 CRNNQ9UBG3 495 aaPredicted RBP15.36■□□□□ 0.05
KRT28-201ENST00000306658 NUFIP1Q9UHK0 495 aaKnown RBP15.36■□□□□ 0.05
KRT28-201ENST00000306658 HHLA2Q9UM44 414 aa15.36■□□□□ 0.05
KRT28-201ENST00000306658 MED19A0JLT2 244 aaPredicted RBP15.35■□□□□ 0.05
KRT28-201ENST00000306658 DOK2O60496 412 aa15.35■□□□□ 0.05
KRT28-201ENST00000306658 CRHP06850 196 aa15.35■□□□□ 0.05
KRT28-201ENST00000306658 SRMP19623 302 aa15.35■□□□□ 0.05
KRT28-201ENST00000306658 ACHEP22303 614 aa15.35■□□□□ 0.05
KRT28-201ENST00000306658 S100A5P33763 92 aa15.35■□□□□ 0.05
KRT28-201ENST00000306658 KIR2DL2P43627 348 aaPredicted RBP15.35■□□□□ 0.05
KRT28-201ENST00000306658 ZNF121P58317 390 aaPredicted RBP15.35■□□□□ 0.05
KRT28-201ENST00000306658 PSG4Q00888 419 aa15.35■□□□□ 0.05
KRT28-201ENST00000306658 LUZP2Q86TE4 346 aa15.35■□□□□ 0.05
KRT28-201ENST00000306658 CROCCP3Q8IVE0 287 aa15.35■□□□□ 0.05
KRT28-201ENST00000306658 OR6Q1Q8NGQ2 317 aa15.35■□□□□ 0.05
KRT28-201ENST00000306658 OR2H1Q9GZK4 316 aa15.35■□□□□ 0.05
KRT28-201ENST00000306658 RNF121Q9H920 327 aa15.35■□□□□ 0.05
KRT28-201ENST00000306658 DHDHQ9UQ10 334 aa15.35■□□□□ 0.05
KRT28-201ENST00000306658 PEX16Q9Y5Y5 336 aa15.35■□□□□ 0.05
KRT28-201ENST00000306658 TLN1Q9Y490 2541 aaKnown RBP15.35■□□□□ 0.05
KRT28-201ENST00000306658 A0A096LPE4 126 aa15.35■□□□□ 0.05
KRT28-201ENST00000306658 A0A1W2PPZ6 126 aa15.35■□□□□ 0.05
KRT28-201ENST00000306658 F5H5K5 113 aa15.35■□□□□ 0.05
KRT28-201ENST00000306658 PRRG2O14669 202 aa15.35■□□□□ 0.05
KRT28-201ENST00000306658 SYNGR3O43761 229 aa15.35■□□□□ 0.05
KRT28-201ENST00000306658 CD2P06729 351 aa15.35■□□□□ 0.05
KRT28-201ENST00000306658 CFL1P23528 166 aaKnown RBP15.35■□□□□ 0.05
KRT28-201ENST00000306658 OTX1P32242 354 aaPredicted RBP15.35■□□□□ 0.05
KRT28-201ENST00000306658 SOX2P48431 317 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms