RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 FZR1Q9UM11 496 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SPG11Q96JI7 2443 aa9.47□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 USF3Q68DE3 2245 aa9.46□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 CENPEQ02224 2701 aa9.46□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 F5H5K5 113 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 M0R135 149 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SELENOFO60613 162 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ICMTO60725 284 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MT-ND5P03915 603 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 LYNP07948 512 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 DBHP09172 617 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 PAX1P15863 534 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SLC2A5P22732 501 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 POLR2IP36954 125 aaKnown RBP9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 NAA10P41227 235 aaPredicted RBP9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SLC15A1P46059 708 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SLC6A9P48067 706 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 NUDT6P53370 316 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TPTEP56180 551 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 GRB2P62993 217 aaKnown RBP9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ELF3P78545 371 aaPredicted RBP9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MOGQ16653 247 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 NKPD1Q17RQ9 610 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 LRRC36Q1X8D7 754 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SWI5Q1ZZU3 235 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SPATA46Q5T0L3 261 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ZNF771Q7L3S4 317 aaPredicted RBP9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TIGD4Q8IY51 512 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 OR5L1Q8NGL2 311 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 OR8J1Q8NGP2 316 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SLC25A40Q8TBP6 338 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SLC7A6Q92536 515 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 APOBEC3DQ96AK3 386 aaPredicted RBP9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SLAMF6Q96DU3 332 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ZNF799Q96GE5 643 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MAP6Q96JE9 813 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 RDH12Q96NR8 316 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 CNN2Q99439 309 aaKnown RBP9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 RAB1BQ9H0U4 201 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 CXXC4Q9H2H0 198 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 DCLRE1BQ9H816 532 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MARCH7Q9H992 704 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 CENPMQ9NSP4 180 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TBCCD1Q9NVR7 557 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SMPD3Q9NY59 655 aaPredicted RBP9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SLCO1C1Q9NYB5 712 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 LAMP5Q9UJQ1 280 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 GMPPBQ9Y5P6 360 aa9.46□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ITPR2Q14571 2701 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MRPL3P09001 348 aaKnown RBP9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ZNF250P15622 560 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TUBG1P23258 451 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 PEX2P28328 305 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 POU4F2Q12837 409 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MALLQ13021 153 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 PCK2Q16822 640 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MST1LQ2TV78 715 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SPATC1Q76KD6 591 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MEPCEQ7L2J0 689 aaKnown RBP9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SLC16A9Q7RTY1 509 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 GALNT4Q8N4A0 578 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 PACRGLQ8N7B6 248 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ZNF283Q8N7M2 679 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ZNF454Q8N9F8 522 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 THEM6Q8WUY1 208 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TRUB1Q8WWH5 349 aaKnown RBP9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 RFKQ969G6 155 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 HRASLS5Q96KN8 279 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MBOAT4Q96T53 435 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TEAD3Q99594 435 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SLC29A1Q99808 456 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 OR2J1Q9GZK6 312 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 PNRC2Q9NPJ4 139 aaKnown RBP9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TUBG2Q9NRH3 451 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 DDX28Q9NUL7 540 aaKnown RBP9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TAAR3PQ9P1P4 343 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TMEM14AQ9Y6G1 99 aa9.45□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 CSMD2Q7Z408 3487 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 IGLV3-9A0A075B6K5 115 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 PLSCR5A0PG75 271 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 CCDC182A6NF36 153 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 SNTNA6NMZ2 147 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 PHYHO14832 338 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 TIMM8AO60220 97 aaPredicted RBP9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MPZL2O60487 215 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 CLPTM1O96005 669 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 NGFP01138 241 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 APOC1P02654 83 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 LCATP04180 440 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ADRA2AP08913 450 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 H2BFMP0C1H6 154 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ACSM4P0C7M7 580 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 PSKH1P11801 424 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ATP6V1E1P36543 226 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ALDH3B1P43353 468 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 GGTLC2Q14390 218 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 MSMPQ1L6U9 139 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ALKBH6Q3KRA9 238 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 ZMAT1Q5H9K5 638 aa9.44□□□□□ -0.9
CSPG4P1Y-201ENST00000306641 AADACL4Q5VUY2 407 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms