RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 NKAIN3Q8N8D7 197 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 ACBD4Q8NC06 268 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 OR6X1Q8NH79 312 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 MOGAT1Q96PD6 335 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 UCN2Q96RP3 112 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 OR51E2Q9H255 320 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 SESN1Q9Y6P5 492 aa8.28□□□□□ -1.08
PTPRE-202ENST00000306042 ARHGEF17Q96PE2 2063 aaPredicted RBP8.28□□□□□ -1.08
PTPRE-202ENST00000306042 J3QKU1 62 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 DEGS1O15121 323 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 TSPAN2O60636 221 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 AMY2AP04746 511 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 CPT2P23786 658 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 APEX1P27695 318 aaKnown RBP8.27□□□□□ -1.09
PTPRE-202ENST00000306042 MPGP29372 298 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 GABRA5P31644 462 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 KLF3P57682 345 aaPredicted RBP8.27□□□□□ -1.09
PTPRE-202ENST00000306042 EGR3Q06889 387 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 C1QL3Q5VWW1 255 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 TMEM81Q6P7N7 255 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 MRGPRGQ86SM5 289 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 TPRA1Q86W33 373 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 ZDHHC23Q8IYP9 409 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 OR2Z1Q8NG97 314 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 NRG4Q8WWG1 115 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 SLC39A7Q92504 469 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 OR14A2Q96R54 314 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 PLK3Q9H4B4 646 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 ZNF221Q9UK13 617 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 TBC1D24Q9ULP9 559 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 WDR81Q562E7 1941 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 ANKRD61A6NGH8 418 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 AQP7P3A6NL99 342 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 TK1P04183 234 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 DDOSTP39656 456 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 GALEQ14376 348 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 SWI5Q1ZZU3 235 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 HFEQ30201 348 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 PLPPR5Q32ZL2 321 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 CNPY1Q3B7I2 92 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 PLEKHN1Q494U1 663 aaPredicted RBP8.27□□□□□ -1.09
PTPRE-202ENST00000306042 CCDC71Q8IV32 467 aaPredicted RBP8.27□□□□□ -1.09
PTPRE-202ENST00000306042 ELMOD2Q8IZ81 293 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 CCDC71LQ8N9Z2 235 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 SUMF1Q8NBK3 374 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 ABHD6Q9BV23 337 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 CHIAQ9BZP6 476 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 ZNF286AQ9HBT8 521 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 NRIP3Q9NQ35 241 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 FLRT3Q9NZU0 649 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 FAM96BQ9Y3D0 163 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 COL6A6A6NMZ7 2263 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 PRSS44E7EML9 344 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 SPINT2O43291 252 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 PPIHO43447 177 aaKnown RBP8.27□□□□□ -1.09
PTPRE-202ENST00000306042 ALDOBP05062 364 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 BLVRBP30043 206 aaPredicted RBP8.27□□□□□ -1.09
PTPRE-202ENST00000306042 LTBQ06643 244 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 LY6DQ14210 128 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 FBXW9Q5XUX1 488 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 MRPL14Q6P1L8 145 aaKnown RBP8.27□□□□□ -1.09
PTPRE-202ENST00000306042 FAM214BQ7L5A3 538 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 LSMEM1Q8N8F7 131 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 OPALINQ96PE5 141 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 KCNJ15Q99712 375 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 GABARAPL1Q9H0R8 117 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 PFDN2Q9UHV9 154 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 H7C1Q1 480 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 ARPC3O15145 178 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 APEHP13798 732 aaKnown RBP8.27□□□□□ -1.09
PTPRE-202ENST00000306042 PRKACAP17612 351 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 NFYBP25208 207 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 CLDN20P56880 219 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 ZNF121P58317 390 aaPredicted RBP8.27□□□□□ -1.09
PTPRE-202ENST00000306042 ZNF45Q02386 682 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 ZMYND11Q15326 602 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 NDNFQ8TB73 568 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 UBE2FQ969M7 185 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 SIGLEC11Q96RL6 698 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 PDCD1LG2Q9BQ51 273 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 PBOV1Q9GZY1 135 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 RGCCQ9H4X1 137 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 IL20Q9NYY1 176 aa8.27□□□□□ -1.09
PTPRE-202ENST00000306042 A0A0J9YW62 118 aa8.26□□□□□ -1.09
PTPRE-202ENST00000306042 SERPINE2P07093 398 aa8.26□□□□□ -1.09
PTPRE-202ENST00000306042 UBBP0CG47 229 aa8.26□□□□□ -1.09
PTPRE-202ENST00000306042 VEGFCP49767 419 aa8.26□□□□□ -1.09
PTPRE-202ENST00000306042 NUFIP2Q7Z417 695 aaKnown RBP8.26□□□□□ -1.09
PTPRE-202ENST00000306042 BBS1Q8NFJ9 593 aa8.26□□□□□ -1.09
PTPRE-202ENST00000306042 OR51F2Q8NH61 342 aa8.26□□□□□ -1.09
PTPRE-202ENST00000306042 PIK3IP1Q96FE7 263 aa8.26□□□□□ -1.09
PTPRE-202ENST00000306042 FN3KRPQ9HA64 309 aa8.26□□□□□ -1.09
PTPRE-202ENST00000306042 R4GMQ9 66 aa8.26□□□□□ -1.09
PTPRE-202ENST00000306042 PCM1Q15154 2024 aa8.26□□□□□ -1.09
PTPRE-202ENST00000306042 SULT1C4O75897 302 aa8.26□□□□□ -1.09
PTPRE-202ENST00000306042 RGS11O94810 467 aa8.26□□□□□ -1.09
PTPRE-202ENST00000306042 EIF2B2P49770 351 aaKnown RBP8.26□□□□□ -1.09
PTPRE-202ENST00000306042 SLC17A1Q14916 467 aa8.26□□□□□ -1.09
PTPRE-202ENST00000306042 ZNF774Q6NX45 483 aa8.26□□□□□ -1.09
PTPRE-202ENST00000306042 BATF2Q8N1L9 274 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms