RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 SLC6A9P48067 706 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 MMP16P51512 607 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 CLDN12P56749 244 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 SOX8P57073 446 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 CDC20Q12834 499 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 ZNF57Q68EA5 555 aaPredicted RBP12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 C20orf196Q8IYI0 205 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 DNAAF1Q8NEP3 725 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 IL17RDQ8NFM7 739 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 OR5H6Q8NGV6 325 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 ALKBH3Q96Q83 286 aaPredicted RBP12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 CRLF2Q9HC73 371 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 CYSLTR2Q9NS75 346 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 TBCCD1Q9NVR7 557 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 SPATA2Q9UM82 520 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 TFECO14948 347 aaPredicted RBP12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 SYT7O43581 403 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 B3GALNT1O75752 331 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 PITPNBP48739 271 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 LHX2P50458 406 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 GFOD2Q3B7J2 385 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 PBOV1Q9GZY1 135 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 LIN7BQ9HAP6 207 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 SPTBN2O15020 2390 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 FREM2Q5SZK8 3169 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 ZNF716A6NP11 495 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 TM4SF5O14894 197 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 CYTIPO60759 359 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 MTRF1O75570 445 aaKnown RBP12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 ITGB2P05107 769 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 GRB2P62993 217 aaKnown RBP12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 KCNMB1Q16558 191 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 ABLIM2Q6H8Q1 611 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 ZFP62Q8NB50 900 aaPredicted RBP12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 SETD6Q8TBK2 473 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 MRI1Q9BV20 369 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 PLEK2Q9NYT0 353 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 TRAV8-7A0A075B6U6 113 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 TRBV5-7A0A0A0MS05 114 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 SLC2A1P11166 492 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 DCTDP32321 178 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 TMEM53Q6P2H8 277 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 MOB1AQ9H8S9 216 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 G6PC2Q9NQR9 355 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 SLC5A6Q9Y289 635 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 PTPRBP23467 1997 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 A0A0G2JMP0 313 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 A0A0X1KG70 313 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 CSF3P09919 207 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 PSMA6P60900 246 aaKnown RBP12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 OR4M2Q8NGB6 313 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 ASB5Q8WWX0 329 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 ZFP3Q96NJ6 502 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 PARPBPQ9NWS1 579 aa12.82□□□□□ -0.36
SHCBP1-201ENST00000303383 TRGV5A0A0B4J1U4 118 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 F5H5K5 113 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 ZNF708P17019 499 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 CX3CR1P49238 355 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 TNFSF10P50591 281 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 CLDN18P56856 261 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 UBE2NLQ5JXB2 153 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 GLT8D1Q68CQ7 371 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 OR10S1Q8NGN2 331 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 CALHM2Q9HA72 323 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 FOXD3Q9UJU5 478 aaPredicted RBP12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 CAMK2AQ9UQM7 478 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 KIAA1549Q9HCM3 1950 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 ACTL6AO96019 429 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 WT1P19544 449 aaPredicted RBP12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 PITPNAQ00169 270 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 CLN3Q13286 438 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 CAMK2BQ13554 666 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 PYHIN1Q6K0P9 492 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 RHOUQ7L0Q8 258 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 PHF21AQ96BD5 680 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 FAM206AQ9NX38 181 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 ARPC4-TTLL3A0A0A6YYG9 625 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 TMEM127O75204 238 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 GLSO94925 669 aaPredicted RBP12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 ZNF20P17024 532 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 ZNF121P58317 390 aaPredicted RBP12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 RTP5Q14D33 572 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 FAM57BQ71RH2 274 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 ABHD12BQ7Z5M8 362 aaPredicted RBP12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 UBE2J2Q8N2K1 259 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 FNDC9Q8TBE3 224 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 PGAM5Q96HS1 289 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 ZCCHC4Q9H5U6 513 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 PPP1R3EQ9H7J1 279 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 TAS2R4Q9NYW5 299 aa12.81□□□□□ -0.36
SHCBP1-201ENST00000303383 IGHV3-9P01782 118 aa12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 MRPS34P82930 218 aaKnown RBP12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 C3AR1Q16581 482 aa12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 CEACAM16Q2WEN9 425 aa12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 CCBE1Q6UXH8 406 aaPredicted RBP12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 ELMOD2Q8IZ81 293 aa12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 ENKURQ8TC29 256 aa12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 SLC22A4Q9H015 551 aa12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 KLK10O43240 276 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms