RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 CNR1P21554 472 aa12.12□□□□□ -0.47
CTTN-201ENST00000301843 SERTAD2Q14140 314 aa12.12□□□□□ -0.47
CTTN-201ENST00000301843 SLC9A3R2Q15599 337 aa12.12□□□□□ -0.47
CTTN-201ENST00000301843 DEFB133Q30KQ1 61 aa12.12□□□□□ -0.47
CTTN-201ENST00000301843 LANCL3Q6ZV70 420 aa12.12□□□□□ -0.47
CTTN-201ENST00000301843 MARCH1Q8TCQ1 289 aa12.12□□□□□ -0.47
CTTN-201ENST00000301843 TSNAXQ99598 290 aaKnown RBP12.12□□□□□ -0.47
CTTN-201ENST00000301843 S1PR5Q9H228 398 aa12.12□□□□□ -0.47
CTTN-201ENST00000301843 RABL2AQ9UBK7 228 aaPredicted RBP12.12□□□□□ -0.47
CTTN-201ENST00000301843 PRODH2Q9UF12 536 aa12.12□□□□□ -0.47
CTTN-201ENST00000301843 RABL2BQ9UNT1 228 aa12.12□□□□□ -0.47
CTTN-201ENST00000301843 TMED7-TICAM2A0A0A6YYA0 188 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 IGLV1-36A0A0B4J1U3 117 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 FAM221BA6H8Z2 402 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 IL33O95760 270 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 TXNDC12O95881 172 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 IL32P24001 234 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 PLCXD2Q0VAA5 305 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 FAM166AQ6J272 317 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 TMEM71Q6P5X7 295 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 TMPRSS9Q7Z410 1059 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 ADGRE4PQ86SQ3 457 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 ZFP82Q8N141 532 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 SLC26A10Q8NG04 563 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 C2CD4CQ8TF44 421 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 TMED6Q8WW62 240 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 BANF2Q9H503 90 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 TNFSF18Q9UNG2 199 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 ADAP1O75689 374 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 AQP8O94778 261 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 ZNF432O94892 652 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 NSA2O95478 260 aaKnown RBP12.11□□□□□ -0.47
CTTN-201ENST00000301843 CALCRP30988 508 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 PRKXP51817 358 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 PPIAP62937 165 aaKnown RBP12.11□□□□□ -0.47
CTTN-201ENST00000301843 NSDHLQ15738 373 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 STK11Q15831 433 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 PLEKHN1Q494U1 663 aaPredicted RBP12.11□□□□□ -0.47
CTTN-201ENST00000301843 PDSS1Q5T2R2 415 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 C9orf40Q8IXQ3 194 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 ELP5Q8TE02 316 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 FN3KRPQ9HA64 309 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 HPF1Q9NWY4 346 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 CLEC1BQ9P126 229 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 GPN3Q9UHW5 284 aaPredicted RBP12.11□□□□□ -0.47
CTTN-201ENST00000301843 FAM96BQ9Y3D0 163 aa12.11□□□□□ -0.47
CTTN-201ENST00000301843 URB1O60287 2271 aaKnown RBP12.11□□□□□ -0.47
CTTN-201ENST00000301843 KIR2DS5A0A0G2JLQ3 304 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 A0A0G2JNG1 304 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 KIR2DS3K7RE56 304 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 AGPAT2O15120 278 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 STK17BO94768 372 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 GP1BBP13224 206 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 CASRP41180 1078 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 UNC119Q13432 240 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 KIR2DS5Q14953 304 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 ELOCQ15369 112 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 MAMDC2Q7Z304 686 aaPredicted RBP12.1□□□□□ -0.47
CTTN-201ENST00000301843 CATSPERDQ86XM0 798 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 PUSL1Q8N0Z8 303 aaKnown RBP12.1□□□□□ -0.47
CTTN-201ENST00000301843 OR5D18Q8NGL1 313 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 LMX1AQ8TE12 382 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 NPRL2Q8WTW4 380 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 MRPL38Q96DV4 380 aaKnown RBP12.1□□□□□ -0.47
CTTN-201ENST00000301843 ADAT3Q96EY9 351 aaPredicted RBP12.1□□□□□ -0.47
CTTN-201ENST00000301843 UPB1Q9UBR1 384 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 OR52A1Q9UKL2 312 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 TRAV36DV7A0A075B6V5 113 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 SPTY2D1-AS1A0A0U1RR47 76 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 ADCYAP1P18509 176 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 NPY4RP50391 375 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 POU3F1Q03052 451 aaPredicted RBP12.1□□□□□ -0.47
CTTN-201ENST00000301843 SNTB1Q13884 538 aaKnown RBP12.1□□□□□ -0.47
CTTN-201ENST00000301843 CCINQ13939 588 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 HLA-DQA1Q5Y7H0 255 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 ZNF440Q8IYI8 595 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 DCUN1D4Q92564 292 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 GDF2Q9UK05 429 aaPredicted RBP12.1□□□□□ -0.47
CTTN-201ENST00000301843 ABCD4O14678 606 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 ACTL6AO96019 429 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 UBBP0CG47 229 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 UBCP0CG48 685 aaKnown RBP12.1□□□□□ -0.47
CTTN-201ENST00000301843 PPICP45877 212 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 RPS27AP62979 156 aaKnown RBP12.1□□□□□ -0.47
CTTN-201ENST00000301843 UBA52P62987 128 aaKnown RBP12.1□□□□□ -0.47
CTTN-201ENST00000301843 C1orf140Q5VVS0 124 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.1□□□□□ -0.47
CTTN-201ENST00000301843 ZNF101Q8IZC7 436 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 KCNRGQ8N5I3 272 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 TMEM229BQ8NBD8 167 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 CLRN3Q8NCR9 226 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 OR52N5Q8NH56 324 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 ADAM19Q9H013 955 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 PARP12Q9H0J9 701 aaKnown RBP12.1□□□□□ -0.47
CTTN-201ENST00000301843 MED9Q9NWA0 146 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 HHLA2Q9UM44 414 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 CSAG2Q9Y5P2 127 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 HS3ST3A1Q9Y663 406 aa12.1□□□□□ -0.47
CTTN-201ENST00000301843 COL4A2P08572 1712 aa12.09□□□□□ -0.47
CTTN-201ENST00000301843 HTR3BO95264 441 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms