RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 LUZP2Q86TE4 346 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 SLC22A24Q8N4F4 322 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 ZNF433Q8N7K0 673 aaPredicted RBP13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 KCNJ15Q99712 375 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 UPB1Q9UBR1 384 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 CKLFQ9UBR5 152 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 DKK4Q9UBT3 224 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 NUFIP1Q9UHK0 495 aaKnown RBP13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 CLEC4AQ9UMR7 237 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 LOC107986453A0A1B0GWG9 222 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 ANKRD61A6NGH8 418 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 ZNF587BE7ETH6 402 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 H3BSH0 61 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 HPGDSO60760 199 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 APOC1P02654 83 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 APEX1P27695 318 aaKnown RBP13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 THBS2P35442 1172 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 CX3CR1P49238 355 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 PRKXP51817 358 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 PCBD1P61457 104 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 SCRN3Q0VDG4 424 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 SLC25A35Q3KQZ1 300 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 P4HA3Q7Z4N8 544 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 ZNF100Q8IYN0 542 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 ZNF283Q8N7M2 679 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 OR13C3Q8NGS6 347 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 ASB5Q8WWX0 329 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 ORAI1Q96D31 301 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 FBXO17Q96EF6 278 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 WACQ9BTA9 647 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 GLRX2Q9NS18 164 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 SLC7A10Q9NS82 523 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 PLEK2Q9NYT0 353 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 ABRACLQ9P1F3 81 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 SLC5A6Q9Y289 635 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 V9GY05 133 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 DNAJC13O75165 2243 aa13.82□□□□□ -0.2
HERPUD1-201ENST00000300302 FABP12A6NFH5 140 aa13.81□□□□□ -0.2
HERPUD1-201ENST00000300302 RPL36A-HNRNPH2H7BZ11 118 aa13.81□□□□□ -0.2
HERPUD1-201ENST00000300302 TTRP02766 147 aa13.81□□□□□ -0.2
HERPUD1-201ENST00000300302 ZNF121P58317 390 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-201ENST00000300302 GALK2Q01415 458 aa13.81□□□□□ -0.2
HERPUD1-201ENST00000300302 ZNF181Q2M3W8 571 aa13.81□□□□□ -0.2
HERPUD1-201ENST00000300302 CCDC92Q53HC0 331 aaPredicted RBP13.81□□□□□ -0.2
HERPUD1-201ENST00000300302 FAM131AQ6UXB0 335 aa13.81□□□□□ -0.2
HERPUD1-201ENST00000300302 HDHD2Q9H0R4 259 aa13.81□□□□□ -0.2
HERPUD1-201ENST00000300302 PLSCR2Q9NRY7 297 aa13.81□□□□□ -0.2
HERPUD1-201ENST00000300302 V9GYH0 126 aa13.81□□□□□ -0.2
HERPUD1-201ENST00000300302 TNRC6AQ8NDV7 1962 aaKnown RBP13.81□□□□□ -0.2
HERPUD1-201ENST00000300302 ANXA2P2A6NMY6 339 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 AIPO00170 330 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 P2RY10O00398 339 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 UPK1BO75841 260 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 TGM6O95932 706 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 IGHV3-9P01782 118 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 ANXA2P07355 339 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 SLC2A2P11168 524 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 ZNF12P17014 697 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 ECH1Q13011 328 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 RAB35Q15286 201 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 RGS21Q2M5E4 152 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 RPUSD3Q6P087 351 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 METAP1DQ6UB28 335 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 ZNF813Q6ZN06 617 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 SLC16A14Q7RTX9 510 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 ABHD12BQ7Z5M8 362 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 LRRC28Q86X40 367 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 SIAH3Q8IW03 269 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 TRMT10AQ8TBZ6 339 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 SPTSSAQ969W0 71 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 TAAR6Q96RI8 345 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 MRI1Q9BV20 369 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 CCDC32Q9BV29 185 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 FOXJ3Q9UPW0 622 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 IFITM5A6NNB3 132 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 FAM25AB3EWG3 89 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 FAM25CB3EWG5 89 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 FAM25GB3EWG6 89 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 K7ENP7 123 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 SGCEO43556 437 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 PDGFAP04085 211 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 ACSM4P0C7M7 580 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 ATF1P18846 271 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 AGTR1P30556 359 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 INO80CQ6PI98 192 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 ADGRE4PQ86SQ3 457 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 LRRTM1Q86UE6 522 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 UBE2J2Q8N2K1 259 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 GMPPAQ96IJ6 420 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 RAXQ9Y2V3 346 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 TIMM10BQ9Y5J6 103 aa13.8□□□□□ -0.2
HERPUD1-201ENST00000300302 LOC400499M0QZD8 3231 aa13.79□□□□□ -0.2
HERPUD1-201ENST00000300302 TRAV8-7A0A075B6U6 113 aa13.79□□□□□ -0.2
HERPUD1-201ENST00000300302 A0A1B0GVI7 797 aa13.79□□□□□ -0.2
HERPUD1-201ENST00000300302 OR14I1A6ND48 311 aa13.79□□□□□ -0.2
HERPUD1-201ENST00000300302 TBX1O43435 398 aa13.79□□□□□ -0.2
HERPUD1-201ENST00000300302 SYT7O43581 403 aa13.79□□□□□ -0.2
HERPUD1-201ENST00000300302 CRYABP02511 175 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-201ENST00000300302 MAS1P04201 325 aa13.79□□□□□ -0.2
HERPUD1-201ENST00000300302 FSTP19883 344 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms