RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 NOP16Q9Y3C1 178 aaKnown RBP14□□□□□ -0.17
UBAP1-201ENST00000297661 ASXL3Q9C0F0 2248 aa14□□□□□ -0.17
UBAP1-201ENST00000297661 PCDH15Q96QU1 1955 aa14□□□□□ -0.17
UBAP1-201ENST00000297661 WRBO00258 174 aa14□□□□□ -0.17
UBAP1-201ENST00000297661 CENPAP49450 140 aa14□□□□□ -0.17
UBAP1-201ENST00000297661 RPL18Q07020 188 aaKnown RBP14□□□□□ -0.17
UBAP1-201ENST00000297661 SLC35F3Q8IY50 421 aa14□□□□□ -0.17
UBAP1-201ENST00000297661 INO80EQ8NBZ0 244 aaPredicted RBP14□□□□□ -0.17
UBAP1-201ENST00000297661 OR5AK2Q8NH90 309 aa14□□□□□ -0.17
UBAP1-201ENST00000297661 ZNF563Q8TA94 476 aa14□□□□□ -0.17
UBAP1-201ENST00000297661 TGM7Q96PF1 710 aa14□□□□□ -0.17
UBAP1-201ENST00000297661 LRRC61Q9BV99 259 aa14□□□□□ -0.17
UBAP1-201ENST00000297661 NXF5Q9H1B4 397 aaKnown RBP14□□□□□ -0.17
UBAP1-201ENST00000297661 SYT4Q9H2B2 425 aa14□□□□□ -0.17
UBAP1-201ENST00000297661 GTF2A1LQ9UNN4 478 aa14□□□□□ -0.17
UBAP1-201ENST00000297661 PLEKHA6Q9Y2H5 1048 aa14□□□□□ -0.17
UBAP1-201ENST00000297661 MRPS17Q9Y2R5 130 aaKnown RBP14□□□□□ -0.17
UBAP1-201ENST00000297661 RP1P56715 2156 aa14□□□□□ -0.17
UBAP1-201ENST00000297661 A0A1W2PPE3 182 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 PRAMEF26H0Y7S4 382 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 DOK2O60496 412 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 UPK3AO75631 287 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 CTAG2O75638 210 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 CLPSP04118 112 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 OR1D4P47884 311 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 SRSF4Q08170 494 aaKnown RBP13.99□□□□□ -0.17
UBAP1-201ENST00000297661 TOMM34Q15785 309 aaPredicted RBP13.99□□□□□ -0.17
UBAP1-201ENST00000297661 RNF212Q495C1 297 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 ZNF684Q5T5D7 378 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 NKAIN2Q5VXU1 208 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 LPCAT3Q6P1A2 487 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 ATG4DQ86TL0 474 aaPredicted RBP13.99□□□□□ -0.17
UBAP1-201ENST00000297661 PPP1R14AQ96A00 147 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 C14orf79Q96F83 325 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 NRIP2Q9BQI9 281 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 MMP26Q9NRE1 261 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 WDFY3Q8IZQ1 3526 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 GPR179Q6PRD1 2367 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 SLC34A2O95436 690 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 CD14P08571 375 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 FBP1P09467 338 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 SDHAP31040 664 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 PRSS3P35030 304 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 PRPS1P60891 318 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 CXADRP78310 365 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 DMWDQ09019 674 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 MESTQ5EB52 335 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 ANKRD16Q6P6B7 361 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 SLC35D2Q76EJ3 337 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 FAM220AQ7Z4H9 259 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 TMEM200AQ86VY9 491 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 GABRG1Q8N1C3 465 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 TSLPQ969D9 159 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 TSPAN32Q96QS1 320 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 MMP25Q9NPA2 562 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 TMEM100Q9NV29 134 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 RCC2Q9P258 522 aaKnown RBP13.99□□□□□ -0.17
UBAP1-201ENST00000297661 GRHPRQ9UBQ7 328 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 CPED1A4D0V7 1026 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 FAM221BA6H8Z2 402 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 RD3LP0DJH9 198 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 TACR3P29371 465 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 FOXL2P58012 376 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 NR0B2Q15466 257 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 Q499Y3 187 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 SLC35D3Q5M8T2 416 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 NDUFAF7Q7L592 441 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 ZNF595Q8IYB9 648 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 OR10R2Q8NGX6 335 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 STOML3Q8TAV4 291 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 RPS4Y2Q8TD47 263 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 RNF141Q8WVD5 230 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 PIK3IP1Q96FE7 263 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 LAMP5Q9UJQ1 280 aa13.99□□□□□ -0.17
UBAP1-201ENST00000297661 NUDT19A8MXV4 375 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 MELTFP08582 738 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 LIPCP11150 499 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 PRKXP51817 358 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 PJVKQ0ZLH3 352 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 FUT7Q11130 342 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 SKP2Q13309 424 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 ALKBH1Q13686 389 aaKnown RBP13.98□□□□□ -0.17
UBAP1-201ENST00000297661 AKIRIN2Q53H80 203 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 ATPAF1Q5TC12 328 aaPredicted RBP13.98□□□□□ -0.17
UBAP1-201ENST00000297661 WBP2NLQ6ICG8 309 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 ZNF227Q86WZ6 799 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 ZNF676Q8N7Q3 588 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 OR51D1Q8NGF3 324 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 TMED6Q8WW62 240 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 TAAR8Q969N4 342 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 SLC25A36Q96CQ1 311 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 POTEKPQ9BYX7 375 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 SMCO4Q9NRQ5 59 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 HS3ST3A1Q9Y663 406 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 IGHV5-51A0A0C4DH38 117 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 M0QYG6 137 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 UTS2O95399 124 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 RAB3DO95716 219 aa13.98□□□□□ -0.17
UBAP1-201ENST00000297661 HLA-AP01891 365 aaKnown RBP13.98□□□□□ -0.17
UBAP1-201ENST00000297661 TPT1P13693 172 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms