RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 PAPLNO95428 1278 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 OR5I1Q13606 314 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 TIGITQ495A1 244 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 MMP21Q8N119 569 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 NANOGP1Q8N7R0 232 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 TM4SF18Q96CE8 201 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 TOX2Q96NM4 488 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 IKZF5Q9H5V7 419 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 GPR55Q9Y2T6 319 aaPredicted RBP9.03□□□□□ -0.96
COL6A3-201ENST00000295550 GDF1P27539 372 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 ULBP3Q9BZM4 244 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 RNF150Q9ULK6 438 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 CRYM-AS1A6NIL9 109 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 HMGA1P17096 107 aaKnown RBP9.03□□□□□ -0.96
COL6A3-201ENST00000295550 UBE2IP63279 158 aaKnown RBP9.03□□□□□ -0.96
COL6A3-201ENST00000295550 ZNF154Q13106 437 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 ZNF787Q6DD87 383 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 LOC102723971A0A1B0GUV8 181 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 ASPDHA6ND91 283 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 P2RY2P41231 377 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 VASPP50552 380 aaPredicted RBP9.03□□□□□ -0.96
COL6A3-201ENST00000295550 SUB1P53999 127 aaKnown RBP eCLIP9.03□□□□□ -0.96
COL6A3-201ENST00000295550 ASB13Q8WXK3 278 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 DYNLRB1Q9NP97 96 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 WNK1Q9H4A3 2382 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 ZNF528Q3MIS6 628 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 VWA1Q6PCB0 445 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 SHISA6Q6ZSJ9 500 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 OR51A2Q8NGJ7 313 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 ANGPTL6Q8NI99 470 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 ZNF629Q9UEG4 869 aaPredicted RBP9.03□□□□□ -0.96
COL6A3-201ENST00000295550 CLEC2DQ9UHP7 191 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 LOC102724200A0A096LPH7 203 aaPredicted RBP9.03□□□□□ -0.96
COL6A3-201ENST00000295550 GPR171O14626 319 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 ZNF354AO60765 605 aaPredicted RBP9.03□□□□□ -0.96
COL6A3-201ENST00000295550 ZNF626Q68DY1 528 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 CPEB2Q7Z5Q1 589 aaKnown RBP9.03□□□□□ -0.96
COL6A3-201ENST00000295550 OR6M1Q8NGM8 313 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 WFDC5Q8TCV5 224 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 HLA-CQ95604 372 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 SLC2A9Q9NRM0 540 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 TRBV11-1A0A0K0K1C0 115 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 A0A1B0GTL3 188 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 ZP2Q05996 745 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 TMEM176BQ3YBM2 270 aaPredicted RBP9.03□□□□□ -0.96
COL6A3-201ENST00000295550 ACTR3CQ9C0K3 210 aaPredicted RBP9.03□□□□□ -0.96
COL6A3-201ENST00000295550 LIN7CQ9NUP9 197 aaKnown RBP9.03□□□□□ -0.96
COL6A3-201ENST00000295550 B3GALT5Q9Y2C3 310 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 ACACAQ13085 2346 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 XKRY2A2RUG3 117 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 DOK2O60496 412 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 PEX11BO96011 259 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 NPPBP16860 134 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 ALKBH1Q13686 389 aaKnown RBP9.03□□□□□ -0.96
COL6A3-201ENST00000295550 GDF7Q7Z4P5 450 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 BRCA1P38398 1863 aaKnown RBP9.03□□□□□ -0.96
COL6A3-201ENST00000295550 CPEP16870 476 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 CTF1Q16619 201 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 XAF1Q6GPH4 301 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 TMEM179BQ7Z7N9 219 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 UBAC2Q8NBM4 344 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 SLC6A18Q96N87 628 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 CDCA3Q99618 268 aaPredicted RBP9.03□□□□□ -0.96
COL6A3-201ENST00000295550 ULBP2Q9BZM5 246 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 GFRA2O00451 464 aa9.02□□□□□ -0.96
COL6A3-201ENST00000295550 GNB1P62873 340 aa9.02□□□□□ -0.96
COL6A3-201ENST00000295550 CALHM3Q86XJ0 350 aa9.02□□□□□ -0.96
COL6A3-201ENST00000295550 NAXDQ8IW45 347 aa9.02□□□□□ -0.96
COL6A3-201ENST00000295550 ZNF485Q8NCK3 441 aa9.02□□□□□ -0.96
COL6A3-201ENST00000295550 APOOQ9BUR5 198 aa9.02□□□□□ -0.96
COL6A3-201ENST00000295550 CTDSP1Q9GZU7 261 aa9.02□□□□□ -0.96
COL6A3-201ENST00000295550 UBQLN4Q9NRR5 601 aa9.02□□□□□ -0.96
COL6A3-201ENST00000295550 DECR2Q9NUI1 292 aa9.02□□□□□ -0.96
COL6A3-201ENST00000295550 CDC14CA4D256 554 aa9.02□□□□□ -0.96
COL6A3-201ENST00000295550 RGS11O94810 467 aa9.02□□□□□ -0.96
COL6A3-201ENST00000295550 RPA2P15927 270 aa9.02□□□□□ -0.96
COL6A3-201ENST00000295550 GABRB1P18505 474 aa9.02□□□□□ -0.96
COL6A3-201ENST00000295550 ZNF680Q8NEM1 530 aa9.02□□□□□ -0.96
COL6A3-201ENST00000295550 OR1J2Q8NGS2 313 aa9.02□□□□□ -0.96
COL6A3-201ENST00000295550 HMGN4O00479 90 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 NXF2Q9GZY0 626 aaKnown RBP9.02□□□□□ -0.97
COL6A3-201ENST00000295550 GLIPR2Q9H4G4 154 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 ZAR1LA6NP61 321 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 P2RY10O00398 339 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 YKT6O15498 198 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 SULT1A3P0DMM9 295 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 SULT1A4P0DMN0 295 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 ALOX5APP20292 161 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 AQP6Q13520 282 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 ACOT6Q3I5F7 207 aaPredicted RBP9.02□□□□□ -0.97
COL6A3-201ENST00000295550 C9orf135Q5VTT2 229 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 Q6ZRG5 221 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 SLC16A14Q7RTX9 510 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 THNSL2Q86YJ6 484 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 OR14A16Q8NHC5 309 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 SLC22A12Q96S37 553 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 RPS19P39019 145 aaKnown RBP9.02□□□□□ -0.97
COL6A3-201ENST00000295550 RAD52P43351 418 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 Q6ZNB5 142 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 BLNKQ8WV28 456 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms