RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 C9orf172C9J069 976 aa17.09■□□□□ 0.33
BRAF-201ENST00000288602 ACOT7O00154 380 aa17.09■□□□□ 0.33
BRAF-201ENST00000288602 PMS2P2O95744 297 aa17.09■□□□□ 0.33
BRAF-201ENST00000288602 RFPL3SP0C7P2 107 aa17.09■□□□□ 0.33
BRAF-201ENST00000288602 ZNF883P0CG24 379 aa17.09■□□□□ 0.33
BRAF-201ENST00000288602 HSD11B1P28845 292 aa17.09■□□□□ 0.33
BRAF-201ENST00000288602 GNALP38405 381 aa17.09■□□□□ 0.33
BRAF-201ENST00000288602 GSG1Q2KHT4 349 aa17.09■□□□□ 0.33
BRAF-201ENST00000288602 TMEM244Q5VVB8 128 aa17.09■□□□□ 0.33
BRAF-201ENST00000288602 BTN2A1Q7KYR7 527 aa17.09■□□□□ 0.33
BRAF-201ENST00000288602 C7orf50Q9BRJ6 194 aaKnown RBP17.09■□□□□ 0.33
BRAF-201ENST00000288602 ANKRD20A5PA0PJZ0 165 aa17.08■□□□□ 0.33
BRAF-201ENST00000288602 CDX4O14627 284 aaPredicted RBP17.08■□□□□ 0.33
BRAF-201ENST00000288602 YES1P07947 543 aa17.08■□□□□ 0.33
BRAF-201ENST00000288602 CXCL3P19876 107 aa17.08■□□□□ 0.33
BRAF-201ENST00000288602 SGCAQ16586 387 aa17.08■□□□□ 0.33
BRAF-201ENST00000288602 HIST3H3Q16695 136 aa17.08■□□□□ 0.33
BRAF-201ENST00000288602 ST3GAL2Q16842 350 aa17.08■□□□□ 0.33
BRAF-201ENST00000288602 OR51E1Q8TCB6 317 aa17.08■□□□□ 0.33
BRAF-201ENST00000288602 ADAT3Q96EY9 351 aaPredicted RBP17.08■□□□□ 0.33
BRAF-201ENST00000288602 STRADBQ9C0K7 418 aa17.08■□□□□ 0.33
BRAF-201ENST00000288602 P4HTMQ9NXG6 502 aa17.08■□□□□ 0.33
BRAF-201ENST00000288602 CIB4A0PJX0 185 aa17.08■□□□□ 0.32
BRAF-201ENST00000288602 C7orf66A4D0T2 115 aa17.08■□□□□ 0.32
BRAF-201ENST00000288602 SYT7O43581 403 aa17.08■□□□□ 0.32
BRAF-201ENST00000288602 CBR3O75828 277 aa17.08■□□□□ 0.32
BRAF-201ENST00000288602 ECDO95905 644 aaPredicted RBP17.08■□□□□ 0.32
BRAF-201ENST00000288602 ALDOBP05062 364 aa17.08■□□□□ 0.32
BRAF-201ENST00000288602 UBCP0CG48 685 aaKnown RBP17.08■□□□□ 0.32
BRAF-201ENST00000288602 CD59P13987 128 aa17.08■□□□□ 0.32
BRAF-201ENST00000288602 GABREP78334 506 aa17.08■□□□□ 0.32
BRAF-201ENST00000288602 GALK2Q01415 458 aa17.08■□□□□ 0.32
BRAF-201ENST00000288602 TAF13Q15543 124 aa17.08■□□□□ 0.32
BRAF-201ENST00000288602 TMEM246Q9BRR3 403 aa17.08■□□□□ 0.32
BRAF-201ENST00000288602 SRXN1Q9BYN0 137 aa17.08■□□□□ 0.32
BRAF-201ENST00000288602 OR51J1Q9H342 316 aa17.08■□□□□ 0.32
BRAF-201ENST00000288602 ZMAT3Q9HA38 289 aaKnown RBP17.08■□□□□ 0.32
BRAF-201ENST00000288602 ZNF275Q9NSD4 429 aaPredicted RBP17.08■□□□□ 0.32
BRAF-201ENST00000288602 COPZ2Q9P299 210 aa17.08■□□□□ 0.32
BRAF-201ENST00000288602 RABL2AQ9UBK7 228 aaPredicted RBP17.08■□□□□ 0.32
BRAF-201ENST00000288602 RABL2BQ9UNT1 228 aa17.08■□□□□ 0.32
BRAF-201ENST00000288602 P04436 131 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 FSTP19883 344 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 VEGFCP49767 419 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 CDK10Q15131 360 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 GFOD2Q3B7J2 385 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 CREB3L2Q70SY1 520 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 ELMOD2Q8IZ81 293 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 OR4D6Q8NGJ1 314 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 OR6N1Q8NGY5 312 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 NTNG2Q96CW9 530 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 TAAR9Q96RI9 348 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 DIABLOQ9NR28 239 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 ZNF319Q9P2F9 582 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 ZNF222Q9UK12 451 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 HPXP02790 462 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 FKBP2P26885 142 aaKnown RBP17.07■□□□□ 0.32
BRAF-201ENST00000288602 SELENOPP49908 381 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 SSPNQ14714 243 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 ZNF239Q16600 458 aaKnown RBP17.07■□□□□ 0.32
BRAF-201ENST00000288602 PCGF3Q3KNV8 242 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 DMRTC1Q5HYR2 192 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 ACER2Q5QJU3 275 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 COMMD2Q86X83 199 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 BEST3Q8N1M1 668 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 OR1J2Q8NGS2 313 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 GLTPQ9NZD2 209 aa17.07■□□□□ 0.32
BRAF-201ENST00000288602 ELF5Q9UKW6 265 aaPredicted RBP17.07■□□□□ 0.32
BRAF-201ENST00000288602 ZNF878C9JN71 531 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 NPIPA2E9PIF3 369 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 NPIPA3F8WFD2 350 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 IGHEP01854 428 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 OC90Q02509 493 aaPredicted RBP17.06■□□□□ 0.32
BRAF-201ENST00000288602 FAPQ12884 760 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 MAB21L1Q13394 359 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 LINC00303Q3SY05 128 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 ZNF627Q7L945 461 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 LRRC18Q8N456 261 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 OR4D10Q8NGI6 311 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 OR14L1PQ8NHC6 308 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 ZNF416Q9BWM5 594 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 DEPPQ9NTK1 212 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 TTC28Q96AY4 2481 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 PSMB1P20618 241 aaKnown RBP17.06■□□□□ 0.32
BRAF-201ENST00000288602 STOMP27105 288 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 CFPP27918 469 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 STARP49675 285 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 SCAND1P57086 179 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 ZNF121P58317 390 aaPredicted RBP17.06■□□□□ 0.32
BRAF-201ENST00000288602 AP3S2P59780 193 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 RNF144BQ7Z419 303 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 NAXDQ8IW45 347 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 OR52N4Q8NGI2 321 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 OR56B4Q8NH76 319 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 NKD1Q969G9 470 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 SGCZQ96LD1 299 aa17.06■□□□□ 0.32
BRAF-201ENST00000288602 PNRC2Q9NPJ4 139 aaKnown RBP17.06■□□□□ 0.32
BRAF-201ENST00000288602 LOC102725191A0A1B0GVB3 256 aa17.05■□□□□ 0.32
BRAF-201ENST00000288602 ANKRD34BA5PLL1 514 aa17.05■□□□□ 0.32
BRAF-201ENST00000288602 ARPC1BO15143 372 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms