RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 EXOSC3Q9NQT5 275 aaKnown RBP14.22□□□□□ -0.13
USP43-201ENST00000285199 ENTPD2Q9Y5L3 495 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 STMND1H3BQB6 276 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 HRKO00198 91 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 CD96P40200 585 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 CX3CR1P49238 355 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 SERTAD2Q14140 314 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 ACTBL2Q562R1 376 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 C9orf152Q5JTZ5 239 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 TMEM182Q6ZP80 229 aaPredicted RBP14.22□□□□□ -0.13
USP43-201ENST00000285199 SECTM1Q8WVN6 248 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 TSLPQ969D9 159 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 SYT3Q9BQG1 590 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 PIGQQ9BRB3 760 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 A0A0B4J2E0 115 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 A0A1B0GX12 115 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 SERTM1A2A2V5 107 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 LY86O95711 162 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 CHATP28329 748 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 PPP1CAP62136 330 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 FMODQ06828 376 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 FUT5Q11128 374 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 TMEM176BQ3YBM2 270 aaPredicted RBP14.22□□□□□ -0.13
USP43-201ENST00000285199 VWA2Q5GFL6 755 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 VN1R4Q7Z5H5 301 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 SFT2D1Q8WV19 159 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 HPSE2Q8WWQ2 592 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 C1orf198Q9H425 327 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 RAB22AQ9UL26 194 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 SLC7A11Q9UPY5 501 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 WIF1Q9Y5W5 379 aa14.22□□□□□ -0.13
USP43-201ENST00000285199 HLA-DQB1P01920 261 aa14.21□□□□□ -0.13
USP43-201ENST00000285199 FABP1P07148 127 aa14.21□□□□□ -0.13
USP43-201ENST00000285199 HOXC8P31273 242 aa14.21□□□□□ -0.13
USP43-201ENST00000285199 RAG2P55895 527 aa14.21□□□□□ -0.13
USP43-201ENST00000285199 MTCP1P56278 107 aa14.21□□□□□ -0.13
USP43-201ENST00000285199 ARIH2OSQ8N7S6 290 aa14.21□□□□□ -0.13
USP43-201ENST00000285199 ADAMTS18Q8TE60 1221 aa14.21□□□□□ -0.13
USP43-201ENST00000285199 PNPLA2Q96AD5 504 aa14.21□□□□□ -0.13
USP43-201ENST00000285199 BORCS8Q96FH0 119 aa14.21□□□□□ -0.13
USP43-201ENST00000285199 NDRG3Q9UGV2 375 aa14.21□□□□□ -0.13
USP43-201ENST00000285199 DOCK1Q14185 1865 aa14.21□□□□□ -0.13
USP43-201ENST00000285199 OR5K4A6NMS3 321 aa14.21□□□□□ -0.13
USP43-201ENST00000285199 NAGAP17050 411 aa14.21□□□□□ -0.13
USP43-201ENST00000285199 SLC17A1Q14916 467 aa14.21□□□□□ -0.13
USP43-201ENST00000285199 TMEM255AQ5JRV8 349 aa14.21□□□□□ -0.13
USP43-201ENST00000285199 OR13H1Q8NG92 308 aa14.21□□□□□ -0.13
USP43-201ENST00000285199 STACQ99469 402 aa14.21□□□□□ -0.13
USP43-201ENST00000285199 SLC19A3Q9BZV2 496 aa14.21□□□□□ -0.13
USP43-201ENST00000285199 NELFAQ9H3P2 528 aa14.21□□□□□ -0.13
USP43-201ENST00000285199 SLC2A4RGQ9NR83 387 aa14.21□□□□□ -0.13
USP43-201ENST00000285199 SIGLEC6O43699 453 aa14.21□□□□□ -0.14
USP43-201ENST00000285199 SPP1P10451 314 aa14.21□□□□□ -0.14
USP43-201ENST00000285199 CTRB1P17538 263 aa14.21□□□□□ -0.14
USP43-201ENST00000285199 ELAVL1Q15717 326 aaKnown RBP14.21□□□□□ -0.14
USP43-201ENST00000285199 CTRB2Q6GPI1 263 aa14.21□□□□□ -0.14
USP43-201ENST00000285199 CHRDL2Q6WN34 429 aa14.21□□□□□ -0.14
USP43-201ENST00000285199 LYG2Q86SG7 212 aa14.21□□□□□ -0.14
USP43-201ENST00000285199 MCEMP1Q8IX19 187 aa14.21□□□□□ -0.14
USP43-201ENST00000285199 RGP1Q92546 391 aaPredicted RBP14.21□□□□□ -0.14
USP43-201ENST00000285199 LDAHQ9H6V9 325 aa14.21□□□□□ -0.14
USP43-201ENST00000285199 A0A087WZY1 265 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 SMCO3A2RU48 225 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 ZFP92A6NM28 416 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 SULT2B1O00204 365 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 CRYBA1P05813 215 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 PDCD1Q15116 288 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 NCMAPQ5T1S8 102 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 TMEM123Q8N131 208 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 ZNF707Q96C28 371 aaPredicted RBP14.2□□□□□ -0.14
USP43-201ENST00000285199 WDR34Q96EX3 536 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 ZDHHC12Q96GR4 267 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 FRRS1LQ9P0K9 344 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 OTOFQ9HC10 1997 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 SHISA8B8ZZ34 492 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 SLC17A2O00624 439 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 PHF1O43189 567 aaPredicted RBP14.2□□□□□ -0.14
USP43-201ENST00000285199 SFTA3P0C7M3 94 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 CASRP41180 1078 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 SFTPA2Q8IWL1 248 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 FAM160A2Q8N612 972 aaPredicted RBP14.2□□□□□ -0.14
USP43-201ENST00000285199 ZNF611Q8N823 705 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 OR5B12Q96R08 314 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 TCEAL7Q9BRU2 100 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 MAGT1Q9H0U3 335 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 GFOD1Q9NXC2 390 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 MRM2Q9UI43 246 aaKnown RBP14.2□□□□□ -0.14
USP43-201ENST00000285199 POLEQ07864 2286 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 MEOX2P50222 304 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 LILRB2Q8N423 598 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 SPICQ8N5J4 248 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 KCNG3Q8TAE7 436 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 SDSLQ96GA7 329 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 TUBG2Q9NRH3 451 aa14.2□□□□□ -0.14
USP43-201ENST00000285199 TRAV36DV7A0A075B6V5 113 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 TMEM218A2RU14 115 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 GALR3O60755 368 aaPredicted RBP14.19□□□□□ -0.14
USP43-201ENST00000285199 ABOP16442 354 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 SLC6A8P48029 635 aa14.19□□□□□ -0.14
USP43-201ENST00000285199 H2BFSP57053 126 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms