RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 HAVCR1Q96D42 359 aa7.48□□□□□ -1.21
TPM3-201ENST00000271850 MEGF10Q96KG7 1140 aa7.48□□□□□ -1.21
TPM3-201ENST00000271850 RBP7Q96R05 134 aa7.48□□□□□ -1.21
TPM3-201ENST00000271850 DIRC2Q96SL1 478 aa7.48□□□□□ -1.21
TPM3-201ENST00000271850 GPA33Q99795 319 aa7.48□□□□□ -1.21
TPM3-201ENST00000271850 ELOVL3Q9HB03 270 aa7.48□□□□□ -1.21
TPM3-201ENST00000271850 TMEM165Q9HC07 324 aa7.48□□□□□ -1.21
TPM3-201ENST00000271850 DDX28Q9NUL7 540 aaKnown RBP7.48□□□□□ -1.21
TPM3-201ENST00000271850 IL19Q9UHD0 177 aa7.48□□□□□ -1.21
TPM3-201ENST00000271850 NDRG4Q9ULP0 352 aaKnown RBP7.48□□□□□ -1.21
TPM3-201ENST00000271850 IGHV2-70DA0A0C4DH43 119 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 LOC100653049A0A140TA62 436 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 PRSS37A4D1T9 235 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 GMNCA6NCL1 334 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 A6NIZ1 184 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 C12orf71A8MTZ7 269 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 EFCAB9A8MZ26 197 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 C22orf46C9J442 243 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 CLDN34H7C241 214 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 NME4O00746 187 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 KRT34O76011 436 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 CD14P08571 375 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 PSKH1P11801 424 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 MDKP21741 143 aaPredicted RBP7.47□□□□□ -1.21
TPM3-201ENST00000271850 FPR2P25090 351 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 MDH2P40926 338 aaKnown RBP7.47□□□□□ -1.21
TPM3-201ENST00000271850 ARHGDIAP52565 204 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 KRTAP10-3P60369 221 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 RAP1BP61224 184 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 PCBD1P61457 104 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 RAP1AP62834 184 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 HIST1H3AP68431 136 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 BAMBIQ13145 260 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 SEC23BQ15437 767 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 MEP1BQ16820 701 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 ARMCX4Q5H9R4 360 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 HIST2H3PS2Q5TEC6 136 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 FAM205BPQ63HN1 556 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 OR2T2Q6IF00 324 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 C1orf94Q6P1W5 598 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 LYPD2Q6UXB3 125 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 FBXW12Q6X9E4 464 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 ZNF841Q6ZN19 808 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 TMPRSS11FQ6ZWK6 438 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 MBOAT2Q6ZWT7 520 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 HIST2H3AQ71DI3 136 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 CBLL1Q75N03 491 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 OAFQ86UD1 273 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 KLBQ86Z14 1044 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 SLC15A3Q8IY34 581 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 C1orf174Q8IYL3 243 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 ALDH16A1Q8IZ83 802 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 PARP8Q8N3A8 854 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 NPEPL1Q8NDH3 523 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 OR2T12Q8NG77 320 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 SLC7A13Q8TCU3 470 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 ACOT11Q8WXI4 607 aaPredicted RBP7.47□□□□□ -1.21
TPM3-201ENST00000271850 UPRTQ96BW1 309 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 RCN3Q96D15 328 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 TSSK2Q96PF2 358 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 GPX7Q96SL4 187 aaPredicted RBP7.47□□□□□ -1.21
TPM3-201ENST00000271850 TMEM246Q9BRR3 403 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 SIKE1Q9BRV8 207 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 FUZQ9BT04 418 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 SSBP4Q9BWG4 385 aaPredicted RBP7.47□□□□□ -1.21
TPM3-201ENST00000271850 SYT4Q9H2B2 425 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 FGFR1OP2Q9NVK5 253 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 PTTG3PQ9NZH4 202 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 VSX1Q9NZR4 365 aaPredicted RBP7.47□□□□□ -1.21
TPM3-201ENST00000271850 ARMCX1Q9P291 453 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 ASH2LQ9UBL3 628 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 IL20RAQ9UHF4 553 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 PPP1R3CQ9UQK1 317 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 SIGLEC7Q9Y286 467 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 COA3Q9Y2R0 106 aaPredicted RBP7.47□□□□□ -1.21
TPM3-201ENST00000271850 LHFPL6Q9Y693 200 aa7.47□□□□□ -1.21
TPM3-201ENST00000271850 TRAV40A0A0B4J280 105 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 ELOVL7A1L3X0 281 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 C5orf63A6NC05 138 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 BBIP1A8MTZ0 92 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 HMGB1P1B2RPK0 211 aaPredicted RBP7.46□□□□□ -1.22
TPM3-201ENST00000271850 F5H5P2 479 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 SLC16A7O60669 478 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 NPPAP01160 153 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 HLA-DPB1P04440 258 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 NR2C1P13056 603 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 RAC2P15153 192 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 TNFRSF1AP19438 455 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 GSTM3P21266 225 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 OMGP23515 440 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 CDKN2AP42771 156 aaKnown RBP7.46□□□□□ -1.22
TPM3-201ENST00000271850 OMPP47874 163 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 RAD23AP54725 363 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 SCRN3Q0VDG4 424 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 MAB21L1Q13394 359 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 AQP6Q13520 282 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 KRR1Q13601 381 aaKnown RBP7.46□□□□□ -1.22
TPM3-201ENST00000271850 TRAM2Q15035 370 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 ZNF404Q494X3 552 aa7.46□□□□□ -1.22
TPM3-201ENST00000271850 ZBED5Q49AG3 693 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms