RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 ADARB1P78563 741 aaKnown RBP10.98□□□□□ -0.65
SS18-202ENST00000269138 GGTLC2Q14390 218 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 SPATA46Q5T0L3 261 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 SHFQ7M4L6 423 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 SLC16A9Q7RTY1 509 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 DTX2Q86UW9 622 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 MUC15Q8N387 334 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 DHRSXQ8N5I4 330 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 OR1J1Q8NGS3 322 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 RHOXF1Q8NHV9 184 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 OTOSQ8NHW6 89 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 ABHD4Q8TB40 342 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 THEM6Q8WUY1 208 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 POFUT1Q9H488 388 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 ADGRL4Q9HBW9 690 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 ATPIF1Q9UII2 106 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 COPS3Q9UNS2 423 aa10.98□□□□□ -0.65
SS18-202ENST00000269138 NAV2Q8IVL1 2488 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 ABHD16AO95870 558 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 ACSM4P0C7M7 580 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 ALOX5APP20292 161 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 ANOS1P23352 680 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 RAD52P43351 418 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 ECH1Q13011 328 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 OCLNQ16625 522 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 SLC25A30Q5SVS4 291 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 AGAP6Q5VW22 663 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 C11orf71Q6IPW1 123 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 OR51G2Q8NGK0 314 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 RNF133Q8WVZ7 376 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 CNN2Q99439 309 aaKnown RBP10.97□□□□□ -0.65
SS18-202ENST00000269138 SYT3Q9BQG1 590 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 ADI1Q9BV57 179 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 MRPL37Q9BZE1 423 aaKnown RBP10.97□□□□□ -0.65
SS18-202ENST00000269138 BCL2L14Q9BZR8 327 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 YIPF3Q9GZM5 350 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 CBLN4Q9NTU7 201 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 DDX28Q9NUL7 540 aaKnown RBP10.97□□□□□ -0.65
SS18-202ENST00000269138 FAIMQ9NVQ4 179 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 HAO2Q9NYQ3 351 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 MYEF2Q9P2K5 600 aaKnown RBP10.97□□□□□ -0.65
SS18-202ENST00000269138 WARS2Q9UGM6 360 aaKnown RBP10.97□□□□□ -0.65
SS18-202ENST00000269138 STARD10Q9Y365 291 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 CMAHPQ9Y471 501 aa10.97□□□□□ -0.65
SS18-202ENST00000269138 C5orf63A6NC05 138 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 PRR32B1ATL7 298 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 OVOL3O00110 214 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 ICMTO60725 284 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 CLPTM1O96005 669 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 GNAO1P09471 354 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 CDKN1AP38936 164 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 PRKXP51817 358 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 AQP4P55087 323 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 PPP1CBP62140 327 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 TAF13Q15543 124 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 SWI5Q1ZZU3 235 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 TMEM255AQ5JRV8 349 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 ZNF691Q5VV52 312 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 TTC23Q5W5X9 447 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 RGS7BPQ6MZT1 257 aaPredicted RBP10.96□□□□□ -0.65
SS18-202ENST00000269138 SLC35F2Q8IXU6 374 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 RFLNBQ8N5W9 214 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 ZNF454Q8N9F8 522 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 SLC25A40Q8TBP6 338 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 APH1BQ8WW43 257 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 MRPL24Q96A35 216 aaKnown RBP10.96□□□□□ -0.65
SS18-202ENST00000269138 MARS2Q96GW9 593 aaKnown RBP10.96□□□□□ -0.65
SS18-202ENST00000269138 COPS4Q9BT78 406 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 TTTY10Q9BZA0 68 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 OR2J1Q9GZK6 312 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 VCXQ9H320 206 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 ELOVL3Q9HB03 270 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 TBCCD1Q9NVR7 557 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 LAMP5Q9UJQ1 280 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 DSCAMO60469 2012 aa10.96□□□□□ -0.65
SS18-202ENST00000269138 CSMD2Q7Z408 3487 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 ZNF878C9JN71 531 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 WBP4O75554 376 aaKnown RBP10.95□□□□□ -0.66
SS18-202ENST00000269138 LYNP07948 512 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 SBK2P0C263 348 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 MPV17P39210 176 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 CAPGP40121 348 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 OPRL1P41146 370 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 NUDT6P53370 316 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 RPS23P62266 143 aaKnown RBP10.95□□□□□ -0.66
SS18-202ENST00000269138 IL5RAQ01344 420 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 MAD2L1BPQ15013 274 aaPredicted RBP10.95□□□□□ -0.66
SS18-202ENST00000269138 EFNB3Q15768 340 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 SMN1Q16637 294 aaKnown RBP10.95□□□□□ -0.66
SS18-202ENST00000269138 DEFB113Q30KQ7 82 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 MEDAGQ5VYS4 303 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 ARL9Q6T311 187 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 NINJ1Q92982 152 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 RFKQ969G6 155 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 PIGTQ969N2 578 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 SPTSSAQ969W0 71 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 DCLRE1CQ96SD1 692 aaKnown RBP10.95□□□□□ -0.66
SS18-202ENST00000269138 TBX5Q99593 518 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 DOK1Q99704 481 aa10.95□□□□□ -0.66
SS18-202ENST00000269138 APOL4Q9BPW4 351 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms