RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 PIN1P1O15428 100 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 ZNHIT1O43257 154 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 FARS2O95363 451 aaKnown RBP12.38□□□□□ -0.43
SS18-201ENST00000269137 RAF1P04049 648 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 C1QTNF9P0C862 333 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 HSD11B1P28845 292 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 PTGER4P35408 488 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 PLA2G5P39877 138 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 ARF1P84077 181 aaKnown RBP12.38□□□□□ -0.43
SS18-201ENST00000269137 SCRN3Q0VDG4 424 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 LINC00303Q3SY05 128 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 HSD17B12Q53GQ0 312 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 ELFN2Q5R3F8 820 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 NSUN5P2Q63ZY6 315 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 OR2A2Q6IF42 318 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 ABHD12BQ7Z5M8 362 aaPredicted RBP12.38□□□□□ -0.43
SS18-201ENST00000269137 RDH10Q8IZV5 341 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 KCNJ15Q99712 375 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 ATF6BQ99941 703 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 PALMDQ9NP74 551 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 NOX4Q9NPH5 578 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 ZNF71Q9NQZ8 489 aaPredicted RBP12.38□□□□□ -0.43
SS18-201ENST00000269137 LUZP4Q9P127 313 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 CRNNQ9UBG3 495 aaPredicted RBP12.38□□□□□ -0.43
SS18-201ENST00000269137 NUFIP1Q9UHK0 495 aaKnown RBP12.38□□□□□ -0.43
SS18-201ENST00000269137 GTF2A1LQ9UNN4 478 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 PEX16Q9Y5Y5 336 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 BSNQ9UPA5 3926 aa12.38□□□□□ -0.43
SS18-201ENST00000269137 OCM2P0CE71 109 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 UBCP0CG48 685 aaKnown RBP12.37□□□□□ -0.43
SS18-201ENST00000269137 GABRA1P14867 456 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 ACHEP22303 614 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 CFL1P23528 166 aaKnown RBP12.37□□□□□ -0.43
SS18-201ENST00000269137 OTX1P32242 354 aaPredicted RBP12.37□□□□□ -0.43
SS18-201ENST00000269137 ECH1Q13011 328 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 RAB35Q15286 201 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 BCL2L15Q5TBC7 163 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 FBXW9Q5XUX1 488 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 UNQ6494/PRO21346Q6UXR6 183 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 FAM214BQ7L5A3 538 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 SKA3Q8IX90 412 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 ELMOD2Q8IZ81 293 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 AP3S1Q92572 193 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 PPP1R14AQ96A00 147 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 C6orf62Q9GZU0 229 aaPredicted RBP12.37□□□□□ -0.43
SS18-201ENST00000269137 HDHD2Q9H0R4 259 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 SLC5A6Q9Y289 635 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 TIMM10BQ9Y5J6 103 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 APOC1P02654 83 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 FAM87AP0C7U9 286 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 SRMP19623 302 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 TMEM244Q5VVB8 128 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 SLC16A14Q7RTX9 510 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 UBE2J2Q8N2K1 259 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 C9orf106Q8NAJ2 232 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 OR10AC1Q8NH08 325 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 S100ZQ8WXG8 99 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 PBOV1Q9GZY1 135 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 AKIP1Q9NQ31 210 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 PLEK2Q9NYT0 353 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 HHLA2Q9UM44 414 aa12.37□□□□□ -0.43
SS18-201ENST00000269137 RP1L1Q8IWN7 2480 aaPredicted RBP12.36□□□□□ -0.43
SS18-201ENST00000269137 SPENQ96T58 3664 aaKnown RBP12.36□□□□□ -0.43
SS18-201ENST00000269137 A0A1W2PPK0 400 aa12.36□□□□□ -0.43
SS18-201ENST00000269137 SGCEO43556 437 aa12.36□□□□□ -0.43
SS18-201ENST00000269137 SYNGR3O43761 229 aa12.36□□□□□ -0.43
SS18-201ENST00000269137 WDR1O75083 606 aa12.36□□□□□ -0.43
SS18-201ENST00000269137 TTRP02766 147 aa12.36□□□□□ -0.43
SS18-201ENST00000269137 MMP7P09237 267 aaPredicted RBP12.36□□□□□ -0.43
SS18-201ENST00000269137 ZNF32P17041 273 aa12.36□□□□□ -0.43
SS18-201ENST00000269137 MPGP29372 298 aa12.36□□□□□ -0.43
SS18-201ENST00000269137 S100A5P33763 92 aa12.36□□□□□ -0.43
SS18-201ENST00000269137 PRKXP51817 358 aa12.36□□□□□ -0.43
SS18-201ENST00000269137 CAV3P56539 151 aa12.36□□□□□ -0.43
SS18-201ENST00000269137 FAPQ12884 760 aa12.36□□□□□ -0.43
SS18-201ENST00000269137 ZNF846Q147U1 533 aa12.36□□□□□ -0.43
SS18-201ENST00000269137 ODF4Q2M2E3 257 aa12.36□□□□□ -0.43
SS18-201ENST00000269137 RSPO1Q2MKA7 263 aaPredicted RBP12.36□□□□□ -0.43
SS18-201ENST00000269137 ZNF585AQ6P3V2 769 aa12.36□□□□□ -0.43
SS18-201ENST00000269137 NR2C2APQ86WQ0 139 aa12.36□□□□□ -0.43
SS18-201ENST00000269137 OR51A4Q8NGJ6 313 aa12.36□□□□□ -0.43
SS18-201ENST00000269137 KCNS3Q9BQ31 491 aa12.36□□□□□ -0.43
SS18-201ENST00000269137 ZCCHC4Q9H5U6 513 aa12.36□□□□□ -0.43
SS18-201ENST00000269137 C12orf49Q9H741 205 aa12.36□□□□□ -0.43
SS18-201ENST00000269137 SMURF1Q9HCE7 757 aa12.36□□□□□ -0.43
SS18-201ENST00000269137 PRSS50Q9UI38 385 aa12.36□□□□□ -0.43
SS18-201ENST00000269137 SPTA1P02549 2419 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 A0A0G2JK05 382 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 MBD3L4A6NDZ8 208 aaPredicted RBP12.35□□□□□ -0.43
SS18-201ENST00000269137 MBD3L3A6NE82 208 aaPredicted RBP12.35□□□□□ -0.43
SS18-201ENST00000269137 OR6C6A6NF89 314 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 MBD3L5A6NJ08 208 aaPredicted RBP12.35□□□□□ -0.43
SS18-201ENST00000269137 CLDN25C9JDP6 229 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 J3QRK9 145 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 NCR1O76036 304 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 CNOT4O95628 575 aaKnown RBP12.35□□□□□ -0.43
SS18-201ENST00000269137 HOXD4P09016 255 aaPredicted RBP12.35□□□□□ -0.43
SS18-201ENST00000269137 RAB3BP20337 219 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 CRYGSP22914 178 aa12.35□□□□□ -0.43
SS18-201ENST00000269137 MAGEB1P43366 347 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms