RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 OR1S1Q8NH92 325 aa11.11□□□□□ -0.63
BEST3-201ENST00000266661 CCDC107Q8WV48 283 aa11.11□□□□□ -0.63
BEST3-201ENST00000266661 MRGPRFQ96AM1 343 aa11.11□□□□□ -0.63
BEST3-201ENST00000266661 POTEKPQ9BYX7 375 aa11.11□□□□□ -0.63
BEST3-201ENST00000266661 FXYD6Q9H0Q3 95 aa11.11□□□□□ -0.63
BEST3-201ENST00000266661 FANCFQ9NPI8 374 aa11.11□□□□□ -0.63
BEST3-201ENST00000266661 SLC22A11Q9NSA0 550 aa11.11□□□□□ -0.63
BEST3-201ENST00000266661 UPB1Q9UBR1 384 aa11.11□□□□□ -0.63
BEST3-201ENST00000266661 CKLFQ9UBR5 152 aa11.11□□□□□ -0.63
BEST3-201ENST00000266661 EP300Q09472 2414 aaPredicted RBP11.11□□□□□ -0.63
BEST3-201ENST00000266661 TRIM77I1YAP6 450 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 RAB27BO00194 218 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 ZNF354AO60765 605 aaPredicted RBP11.1□□□□□ -0.63
BEST3-201ENST00000266661 FCER2P06734 321 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 MMP16P51512 607 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 NXPH1P58417 271 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 SORDQ00796 357 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 TAGLNQ01995 201 aaKnown RBP11.1□□□□□ -0.63
BEST3-201ENST00000266661 FMODQ06828 376 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 C4orf46Q504U0 113 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 ZNF529Q6P280 563 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 ZNF813Q6ZN06 617 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 ZNF704Q6ZNC4 412 aaPredicted RBP11.1□□□□□ -0.63
BEST3-201ENST00000266661 LANCL3Q6ZV70 420 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 COX15Q7KZN9 410 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 DCXRQ7Z4W1 244 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 HSD17B13Q7Z5P4 300 aaPredicted RBP11.1□□□□□ -0.63
BEST3-201ENST00000266661 MISPQ8IVT2 679 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 KDM8Q8N371 416 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 ZBTB44Q8NCP5 570 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 MFSD8Q8NHS3 518 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 TNFAIP8L1Q8WVP5 186 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 RNF133Q8WVZ7 376 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 SLC6A7Q99884 636 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 FAM206AQ9NX38 181 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 MED11Q9P086 117 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 COPS7AQ9UBW8 275 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 GDF2Q9UK05 429 aaPredicted RBP11.1□□□□□ -0.63
BEST3-201ENST00000266661 GTF2A1LQ9UNN4 478 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 DCDC2BA2VCK2 349 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 ANKUB1A6NFN9 424 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 HPP00738 406 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 GMFBP60983 142 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 SPOCK1Q08629 439 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 TMEM244Q5VVB8 128 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 OR10K2Q6IF99 312 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 SLC51BQ86UW2 128 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 NFAM1Q8NET5 270 aaPredicted RBP11.1□□□□□ -0.63
BEST3-201ENST00000266661 OR13C3Q8NGS6 347 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 COQ8AQ8NI60 647 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 ST8SIA1Q92185 356 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 ARL5BQ96KC2 179 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 CMKLR1Q99788 373 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 MFFQ9GZY8 342 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 PPA2Q9H2U2 334 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 HRH3Q9Y5N1 445 aa11.1□□□□□ -0.63
BEST3-201ENST00000266661 RIF1Q5UIP0 2472 aaKnown RBP11.09□□□□□ -0.63
BEST3-201ENST00000266661 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.09□□□□□ -0.63
BEST3-201ENST00000266661 A0A1B0GX78 115 aa11.09□□□□□ -0.63
BEST3-201ENST00000266661 CPED1A4D0V7 1026 aa11.09□□□□□ -0.63
BEST3-201ENST00000266661 RHPN2P1A8MT19 583 aa11.09□□□□□ -0.63
BEST3-201ENST00000266661 IL2RAP01589 272 aa11.09□□□□□ -0.63
BEST3-201ENST00000266661 AMY2AP04746 511 aa11.09□□□□□ -0.63
BEST3-201ENST00000266661 SLC25A4P12235 298 aa11.09□□□□□ -0.63
BEST3-201ENST00000266661 ZBTB25P24278 435 aa11.09□□□□□ -0.63
BEST3-201ENST00000266661 HNRNPKP61978 463 aaKnown RBP eCLIP11.09□□□□□ -0.63
BEST3-201ENST00000266661 RNF4P78317 190 aa11.09□□□□□ -0.63
BEST3-201ENST00000266661 CLVS2Q5SYC1 327 aa11.09□□□□□ -0.63
BEST3-201ENST00000266661 TMEM81Q6P7N7 255 aa11.09□□□□□ -0.63
BEST3-201ENST00000266661 H1FNTQ75WM6 255 aaPredicted RBP11.09□□□□□ -0.63
BEST3-201ENST00000266661 ZNF627Q7L945 461 aa11.09□□□□□ -0.63
BEST3-201ENST00000266661 WDR5BQ86VZ2 330 aa11.09□□□□□ -0.63
BEST3-201ENST00000266661 NKAIN3Q8N8D7 197 aa11.09□□□□□ -0.63
BEST3-201ENST00000266661 BVESQ8NE79 360 aa11.09□□□□□ -0.63
BEST3-201ENST00000266661 OR5M8Q8NGP6 311 aa11.09□□□□□ -0.63
BEST3-201ENST00000266661 FOXRED1Q96CU9 486 aaPredicted RBP11.09□□□□□ -0.63
BEST3-201ENST00000266661 ZNF501Q96CX3 271 aaPredicted RBP11.09□□□□□ -0.63
BEST3-201ENST00000266661 DPYSL5Q9BPU6 564 aa11.09□□□□□ -0.63
BEST3-201ENST00000266661 DUSP15Q9H1R2 295 aaPredicted RBP11.09□□□□□ -0.63
BEST3-201ENST00000266661 TMEM138Q9NPI0 162 aa11.09□□□□□ -0.63
BEST3-201ENST00000266661 CTSFQ9UBX1 484 aa11.09□□□□□ -0.63
BEST3-201ENST00000266661 FBLN5Q9UBX5 448 aa11.09□□□□□ -0.63
BEST3-201ENST00000266661 ZNF230Q9UIE0 474 aaPredicted RBP11.09□□□□□ -0.63
BEST3-201ENST00000266661 MKL2Q9ULH7 1088 aa11.09□□□□□ -0.63
BEST3-201ENST00000266661 ZNF736B4DX44 427 aaPredicted RBP11.08□□□□□ -0.64
BEST3-201ENST00000266661 KRBOX1C9JBD0 128 aa11.08□□□□□ -0.64
BEST3-201ENST00000266661 TTRP02766 147 aa11.08□□□□□ -0.64
BEST3-201ENST00000266661 UBCP0CG48 685 aaKnown RBP11.08□□□□□ -0.64
BEST3-201ENST00000266661 ZNF28P17035 718 aa11.08□□□□□ -0.64
BEST3-201ENST00000266661 NAGAP17050 411 aa11.08□□□□□ -0.64
BEST3-201ENST00000266661 HSD11B1P28845 292 aa11.08□□□□□ -0.64
BEST3-201ENST00000266661 HOXA6P31267 233 aa11.08□□□□□ -0.64
BEST3-201ENST00000266661 NUP62P37198 522 aaPredicted RBP11.08□□□□□ -0.64
BEST3-201ENST00000266661 DNASE1L1P49184 302 aa11.08□□□□□ -0.64
BEST3-201ENST00000266661 DHRS2Q13268 280 aa11.08□□□□□ -0.64
BEST3-201ENST00000266661 UNC119Q13432 240 aa11.08□□□□□ -0.64
BEST3-201ENST00000266661 ZNF528Q3MIS6 628 aa11.08□□□□□ -0.64
BEST3-201ENST00000266661 PXDC1Q5TGL8 231 aa11.08□□□□□ -0.64
BEST3-201ENST00000266661 LRFN4Q6PJG9 635 aa11.08□□□□□ -0.64
BEST3-201ENST00000266661 TFAP2EQ6VUC0 442 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms