RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 MED18Q9BUE0 208 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 DNAJB12Q9NXW2 375 aaKnown RBP12.66□□□□□ -0.38
CDH3-201ENST00000264012 TNFSF11O14788 317 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 EIF4EP06730 217 aaKnown RBP12.66□□□□□ -0.38
CDH3-201ENST00000264012 FAM199XQ6PEV8 388 aaPredicted RBP12.66□□□□□ -0.38
CDH3-201ENST00000264012 FJX1Q86VR8 437 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 C1QTNF6Q9BXI9 259 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 PBOV1Q9GZY1 135 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 A0A096LPE4 126 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 A0A1W2PPZ6 126 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 IMPA2O14732 288 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 SHBQ15464 509 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 PCK2Q16822 640 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 OR5AS1Q8N127 324 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 OR52H1Q8NGJ2 320 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 NEURL2Q9BR09 285 aa12.66□□□□□ -0.38
CDH3-201ENST00000264012 GDF2Q9UK05 429 aaPredicted RBP12.66□□□□□ -0.38
CDH3-201ENST00000264012 TMEM265A0A087WTH1 108 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 ICMTO60725 284 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 MED6O75586 246 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 C1QBP02746 253 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 PHLDA2Q53GA4 152 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 KIRREL1Q96J84 757 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 CRLF2Q9HC73 371 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 NRXN2Q9P2S2 1712 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 C1orf196B1AJZ1 125 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 PTGER4P35408 488 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 IDH3GP51553 393 aaPredicted RBP12.65□□□□□ -0.38
CDH3-201ENST00000264012 DUSP2Q05923 314 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 SFRP5Q5T4F7 317 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 DMBX1Q8NFW5 382 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 OR51F2Q8NH61 342 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 TAAR9Q96RI9 348 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 POFUT1Q9H488 388 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 TMEM100Q9NV29 134 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 H7C1Q1 480 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 EPHA8P29322 1005 aaPredicted RBP12.65□□□□□ -0.38
CDH3-201ENST00000264012 ECI1P42126 302 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 LUMP51884 338 aaPredicted RBP12.65□□□□□ -0.38
CDH3-201ENST00000264012 C2orf76Q3KRA6 126 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 BARHL1Q9BZE3 327 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 GCM1Q9NP62 436 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 SDHAF2Q9NX18 166 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 CCDC187A0A096LP49 1063 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 TUSC2O75896 110 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 EDDM3BP56851 147 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 TRA2AQ13595 282 aaKnown RBP eCLIP12.65□□□□□ -0.38
CDH3-201ENST00000264012 IL11RAQ14626 422 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 XAF1Q6GPH4 301 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 UPRTQ96BW1 309 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 SARAFQ96BY9 339 aa12.65□□□□□ -0.38
CDH3-201ENST00000264012 BRWD3Q6RI45 1802 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 A0A1W2PPV4 95 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 SHISA8B8ZZ34 492 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 CT62P0C5K7 136 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 S100A12P80511 92 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 MC2RQ01718 297 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 OR14K1Q8NGZ2 314 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 PCNPQ8WW12 178 aaKnown RBP12.64□□□□□ -0.39
CDH3-201ENST00000264012 TAAR8Q969N4 342 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 DEGS1O15121 323 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 CSF3P09919 207 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 PEA15Q15121 130 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 GABRG1Q8N1C3 465 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 C11orf40Q8WZ69 217 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 USB1Q9BQ65 265 aaKnown RBP12.64□□□□□ -0.39
CDH3-201ENST00000264012 RTL8AQ9BWD3 113 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 SPACA1Q9HBV2 294 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 RPS10P5Q9NQ39 176 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 C5orf49A4QMS7 147 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 IFNA4P05014 189 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 ALOX5APP20292 161 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 MPLP40238 635 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 DSCR4P56555 118 aaPredicted RBP12.64□□□□□ -0.39
CDH3-201ENST00000264012 OR10K2Q6IF99 312 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 CARFQ8N187 725 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 TEX19Q8NA77 164 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 ROBO4Q8WZ75 1007 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 ZNF764Q96H86 408 aaPredicted RBP12.64□□□□□ -0.39
CDH3-201ENST00000264012 DOK1Q99704 481 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 ARPC5LQ9BPX5 153 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 KIR2DS1A0A191URI9 304 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 EFSO43281 561 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 EPXP11678 715 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 IL9P15248 144 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 B4GALT1P15291 398 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 S100A11P31949 105 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 KIR2DS4P43632 304 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 F2RL1P55085 397 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 KIR2DS1Q14954 304 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 EBPQ15125 230 aaKnown RBP12.64□□□□□ -0.39
CDH3-201ENST00000264012 RNLSQ5VYX0 342 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 DND1Q8IYX4 353 aaKnown RBP12.64□□□□□ -0.39
CDH3-201ENST00000264012 CPNE4Q96A23 557 aaPredicted RBP12.64□□□□□ -0.39
CDH3-201ENST00000264012 DERL3Q96Q80 235 aa12.64□□□□□ -0.39
CDH3-201ENST00000264012 FYTTD1Q96QD9 318 aaKnown RBP12.64□□□□□ -0.39
CDH3-201ENST00000264012 TMEM200CA6NKL6 621 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 ARR3P36575 388 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 RPL35P42766 123 aaKnown RBP12.63□□□□□ -0.39
CDH3-201ENST00000264012 EDDM3AQ14507 147 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms