RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 AQP3Q92482 292 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 SHARPINQ9H0F6 387 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 CENPMQ9NSP4 180 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 SUSD2Q9UGT4 822 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 FBXO4Q9UKT5 387 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 METTL21EPA6NDL7 271 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 LGALS8O00214 317 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 H2BFMP0C1H6 154 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 UBCP0CG48 685 aaKnown RBP13.61□□□□□ -0.23
DDX56-201ENST00000258772 DAP3P51398 398 aaKnown RBP13.61□□□□□ -0.23
DDX56-201ENST00000258772 MMP16P51512 607 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 FOXL2P58012 376 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 PAPD4Q6PIY7 484 aaKnown RBP13.61□□□□□ -0.23
DDX56-201ENST00000258772 ZNF813Q6ZN06 617 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 ZNF584Q8IVC4 421 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 ST8SIA1Q92185 356 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 NKD1Q969G9 470 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 LMAN1LQ9HAT1 526 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 MED29Q9NX70 200 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 CTSFQ9UBX1 484 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 RAB22AQ9UL26 194 aa13.61□□□□□ -0.23
DDX56-201ENST00000258772 PHF3Q92576 2039 aaKnown RBP13.6□□□□□ -0.23
DDX56-201ENST00000258772 SDK1Q7Z5N4 2213 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 CABIN1Q9Y6J0 2220 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 A0A1B0GTI1 187 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 OR14I1A6ND48 311 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 ANKUB1A6NFN9 424 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 WIPF3A6NGB9 483 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 OR5H14A6NHG9 310 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 RAB27BO00194 218 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 BET1O15155 118 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 RLN2P04090 185 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 NAGAP17050 411 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 AGTR1P30556 359 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 CAPZA1P52907 286 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 POU3F1Q03052 451 aaPredicted RBP13.6□□□□□ -0.23
DDX56-201ENST00000258772 ZNF260Q3ZCT1 412 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 RAB12Q6IQ22 244 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 C17orf107Q6ZR85 190 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 CD163Q86VB7 1156 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 PAQR4Q8N4S7 273 aaPredicted RBP13.6□□□□□ -0.23
DDX56-201ENST00000258772 BVESQ8NE79 360 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 OR5M8Q8NGP6 311 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 RNF133Q8WVZ7 376 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 FGGYQ96C11 551 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 CHRDQ9H2X0 955 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 CNTD2Q9H8S5 307 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 EXPH5Q8NEV8 1989 aa13.6□□□□□ -0.23
DDX56-201ENST00000258772 DISC1C4P0D8 188 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 TEX46H3BTG2 121 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 EIF1AYO14602 144 aaKnown RBP13.59□□□□□ -0.23
DDX56-201ENST00000258772 ZNF354AO60765 605 aaPredicted RBP13.59□□□□□ -0.23
DDX56-201ENST00000258772 HPP00738 406 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 CSN2P05814 226 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 MGMTP16455 207 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 CD34P28906 385 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 BDKRB2P30411 391 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 APOBEC1P41238 236 aaKnown RBP13.59□□□□□ -0.23
DDX56-201ENST00000258772 FBXW4P57775 412 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 HSF1Q00613 529 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 TLE3Q04726 772 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 SRSF4Q08170 494 aaKnown RBP13.59□□□□□ -0.23
DDX56-201ENST00000258772 FGL1Q08830 312 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 C17orf67Q0P5P2 114 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 MEF2DQ14814 521 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 NKPD1Q17RQ9 610 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 PHF19Q5T6S3 580 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 TMEM81Q6P7N7 255 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 HSD17B13Q7Z5P4 300 aaPredicted RBP13.59□□□□□ -0.23
DDX56-201ENST00000258772 DUSP15Q9H1R2 295 aaPredicted RBP13.59□□□□□ -0.23
DDX56-201ENST00000258772 VSIG4Q9Y279 399 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 A0A0D9SG52 128 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 CPED1A4D0V7 1026 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 NPIPB13A6NJU9 1138 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 NPIPB4C9JG80 1138 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 DUX1O43812 170 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 PIAS2O75928 621 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 NXPH1P58417 271 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 CXADRP78310 365 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 FJX1Q86VR8 437 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 ZNF501Q96CX3 271 aaPredicted RBP13.59□□□□□ -0.23
DDX56-201ENST00000258772 CHST11Q9NPF2 352 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 FAM206AQ9NX38 181 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 SLC2A8Q9NY64 477 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 SEMA5BQ9P283 1151 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 NOP16Q9Y3C1 178 aaKnown RBP13.59□□□□□ -0.23
DDX56-201ENST00000258772 MYO15AQ9UKN7 3530 aa13.59□□□□□ -0.23
DDX56-201ENST00000258772 HLA-AP01891 365 aaKnown RBP13.58□□□□□ -0.23
DDX56-201ENST00000258772 HSD11B1P28845 292 aa13.58□□□□□ -0.23
DDX56-201ENST00000258772 BTN1A1Q13410 526 aa13.58□□□□□ -0.23
DDX56-201ENST00000258772 CDNFQ49AH0 187 aa13.58□□□□□ -0.23
DDX56-201ENST00000258772 LIN54Q6MZP7 749 aa13.58□□□□□ -0.23
DDX56-201ENST00000258772 LPCAT3Q6P1A2 487 aa13.58□□□□□ -0.23
DDX56-201ENST00000258772 ARSKQ6UWY0 536 aa13.58□□□□□ -0.23
DDX56-201ENST00000258772 EIF4E3Q8N5X7 224 aaKnown RBP13.58□□□□□ -0.23
DDX56-201ENST00000258772 OR52N4Q8NGI2 321 aa13.58□□□□□ -0.23
DDX56-201ENST00000258772 THAP3Q8WTV1 239 aaPredicted RBP13.58□□□□□ -0.23
DDX56-201ENST00000258772 PMEPA1Q969W9 287 aa13.58□□□□□ -0.23
DDX56-201ENST00000258772 ZBTB8AQ96BR9 441 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms