RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 ASH2LQ9UBL3 628 aa20.63■□□□□ 0.89
SYNGR3-201ENST00000248121 DHDHQ9UQ10 334 aa20.63■□□□□ 0.89
SYNGR3-201ENST00000248121 URB1O60287 2271 aaKnown RBP20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 CEACAM4O75871 244 aa20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 SLC34A2O95436 690 aa20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 ISG15P05161 165 aa20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 FAM157BP0CG42 384 aa20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 THRSPQ92748 146 aa20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 PNRC2Q9NPJ4 139 aaKnown RBP20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 FOXD3Q9UJU5 478 aaPredicted RBP20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 ARPC4-TTLL3A0A0A6YYG9 625 aa20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 LOC107986453A0A1B0GWG9 222 aa20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 ANXA2P2A6NMY6 339 aa20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 UBL3O95164 117 aa20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 ANXA2P07355 339 aaKnown RBP20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 POU3F2P20265 443 aaPredicted RBP20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 NTF4P34130 210 aa20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 CARD18P57730 90 aa20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 C10orf128Q5T292 105 aa20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 ASB18Q6ZVZ8 466 aa20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 ZFP62Q8NB50 900 aaPredicted RBP20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 OR6N1Q8NGY5 312 aa20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 B4GALT7Q9UBV7 327 aa20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 POLR1DQ9Y2S0 133 aa20.62■□□□□ 0.89
SYNGR3-201ENST00000248121 KLRC4-KLRK1H3BQV0 150 aa20.61■□□□□ 0.89
SYNGR3-201ENST00000248121 RER1O15258 196 aa20.61■□□□□ 0.89
SYNGR3-201ENST00000248121 CXCL13O43927 109 aa20.61■□□□□ 0.89
SYNGR3-201ENST00000248121 CALCBP10092 127 aa20.61■□□□□ 0.89
SYNGR3-201ENST00000248121 DCTDP32321 178 aa20.61■□□□□ 0.89
SYNGR3-201ENST00000248121 MAP2K3P46734 347 aa20.61■□□□□ 0.89
SYNGR3-201ENST00000248121 IZUMO1Q8IYV9 350 aa20.61■□□□□ 0.89
SYNGR3-201ENST00000248121 RFT1Q96AA3 541 aa20.61■□□□□ 0.89
SYNGR3-201ENST00000248121 ZNF845Q96IR2 970 aaPredicted RBP20.61■□□□□ 0.89
SYNGR3-201ENST00000248121 HHLA2Q9UM44 414 aa20.61■□□□□ 0.89
SYNGR3-201ENST00000248121 MSRB2Q9Y3D2 182 aa20.61■□□□□ 0.89
SYNGR3-201ENST00000248121 EEF1E1O43324 174 aaKnown RBP20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 LYRM1O43325 122 aa20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 LMX1BO60663 402 aa20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 TTRP02766 147 aa20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 IGFBP3P17936 291 aaPredicted RBP20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 ACHEP22303 614 aa20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 PPIAP62937 165 aaKnown RBP20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 GLCCI1Q86VQ1 547 aa20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 OR10D3Q8NH80 312 aa20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 ZNF775Q96BV0 537 aaPredicted RBP20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 SF3B5Q9BWJ5 86 aaKnown RBP20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 HDHD2Q9H0R4 259 aa20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 DDX28Q9NUL7 540 aaKnown RBP20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 RBFOX1Q9NWB1 397 aaKnown RBP20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 CAMK2AQ9UQM7 478 aa20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 ZNF716A6NP11 495 aa20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 CFPP27918 469 aa20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 NR4A2P43354 598 aa20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 PLA2G7Q13093 441 aa20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 BCL2L15Q5TBC7 163 aa20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 FOXL2NBQ6ZUU3 175 aa20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 OR2AJ1Q8NGZ0 328 aa20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 OR2V1Q8NHB1 315 aa20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 SNIP1Q8TAD8 396 aaKnown RBP20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 ROBO4Q8WZ75 1007 aa20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 MRPS7Q9Y2R9 242 aaKnown RBP20.6■□□□□ 0.89
SYNGR3-201ENST00000248121 ZNF878C9JN71 531 aa20.59■□□□□ 0.89
SYNGR3-201ENST00000248121 P2RY10O00398 339 aa20.59■□□□□ 0.89
SYNGR3-201ENST00000248121 WISP2O76076 250 aa20.59■□□□□ 0.89
SYNGR3-201ENST00000248121 ACSM4P0C7M7 580 aa20.59■□□□□ 0.89
SYNGR3-201ENST00000248121 SDHBP21912 280 aa20.59■□□□□ 0.89
SYNGR3-201ENST00000248121 ANOS1P23352 680 aa20.59■□□□□ 0.89
SYNGR3-201ENST00000248121 LHX2P50458 406 aa20.59■□□□□ 0.89
SYNGR3-201ENST00000248121 MMP15P51511 669 aa20.59■□□□□ 0.89
SYNGR3-201ENST00000248121 DGCR2P98153 550 aa20.59■□□□□ 0.89
SYNGR3-201ENST00000248121 ZNF704Q6ZNC4 412 aaPredicted RBP20.59■□□□□ 0.89
SYNGR3-201ENST00000248121 YIPF5Q969M3 257 aa20.59■□□□□ 0.89
SYNGR3-201ENST00000248121 NABP1Q96AH0 204 aa20.59■□□□□ 0.89
SYNGR3-201ENST00000248121 ZFP3Q96NJ6 502 aa20.59■□□□□ 0.89
SYNGR3-201ENST00000248121 ZNF416Q9BWM5 594 aa20.59■□□□□ 0.89
SYNGR3-201ENST00000248121 ABCG5Q9H222 651 aa20.59■□□□□ 0.89
SYNGR3-201ENST00000248121 TAS2R4Q9NYW5 299 aa20.59■□□□□ 0.89
SYNGR3-201ENST00000248121 FLVCR1Q9Y5Y0 555 aa20.59■□□□□ 0.89
SYNGR3-201ENST00000248121 TFECO14948 347 aaPredicted RBP20.58■□□□□ 0.89
SYNGR3-201ENST00000248121 PDGFAP04085 211 aa20.58■□□□□ 0.89
SYNGR3-201ENST00000248121 ITGA5P08648 1049 aa20.58■□□□□ 0.89
SYNGR3-201ENST00000248121 EIF2S3P41091 472 aaKnown RBP20.58■□□□□ 0.89
SYNGR3-201ENST00000248121 C3AR1Q16581 482 aa20.58■□□□□ 0.89
SYNGR3-201ENST00000248121 ZNF57Q68EA5 555 aaPredicted RBP20.58■□□□□ 0.89
SYNGR3-201ENST00000248121 SERPINA12Q8IW75 414 aa20.58■□□□□ 0.89
SYNGR3-201ENST00000248121 SPACA3Q8IXA5 215 aa20.58■□□□□ 0.89
SYNGR3-201ENST00000248121 ELMOD2Q8IZ81 293 aa20.58■□□□□ 0.89
SYNGR3-201ENST00000248121 HPS1Q92902 700 aa20.58■□□□□ 0.89
SYNGR3-201ENST00000248121 ZNF837Q96EG3 531 aaPredicted RBP20.58■□□□□ 0.89
SYNGR3-201ENST00000248121 ZC3HAV1LQ96H79 300 aaKnown RBP20.58■□□□□ 0.89
SYNGR3-201ENST00000248121 MRI1Q9BV20 369 aa20.58■□□□□ 0.89
SYNGR3-201ENST00000248121 PBOV1Q9GZY1 135 aa20.58■□□□□ 0.89
SYNGR3-201ENST00000248121 FOXJ3Q9UPW0 622 aa20.58■□□□□ 0.89
SYNGR3-201ENST00000248121 RTTNQ86VV8 2226 aa20.58■□□□□ 0.89
SYNGR3-201ENST00000248121 ANKRD11Q6UB99 2663 aaPredicted RBP20.58■□□□□ 0.89
SYNGR3-201ENST00000248121 ATMQ13315 3056 aa20.58■□□□□ 0.89
SYNGR3-201ENST00000248121 K7EM74 188 aa20.58■□□□□ 0.88
SYNGR3-201ENST00000248121 NR2C1P13056 603 aa20.58■□□□□ 0.88
SYNGR3-201ENST00000248121 FSTP19883 344 aa20.58■□□□□ 0.88
SYNGR3-201ENST00000248121 SRYQ05066 204 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms