RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 ZP4Q12836 540 aa12.85□□□□□ -0.35
HIF3A-202ENST00000244303 MPPED2Q15777 294 aa12.85□□□□□ -0.35
HIF3A-202ENST00000244303 PCK2Q16822 640 aa12.85□□□□□ -0.35
HIF3A-202ENST00000244303 WDR74Q6RFH5 385 aaPredicted RBP12.85□□□□□ -0.35
HIF3A-202ENST00000244303 H1FNTQ75WM6 255 aaPredicted RBP12.85□□□□□ -0.35
HIF3A-202ENST00000244303 TMED4Q7Z7H5 227 aa12.85□□□□□ -0.35
HIF3A-202ENST00000244303 KMT5CQ86Y97 462 aa12.85□□□□□ -0.35
HIF3A-202ENST00000244303 APCDD1LQ8NCL9 501 aa12.85□□□□□ -0.35
HIF3A-202ENST00000244303 OR4D6Q8NGJ1 314 aa12.85□□□□□ -0.35
HIF3A-202ENST00000244303 STT3BQ8TCJ2 826 aa12.85□□□□□ -0.35
HIF3A-202ENST00000244303 ST8SIA1Q92185 356 aa12.85□□□□□ -0.35
HIF3A-202ENST00000244303 REG4Q9BYZ8 158 aa12.85□□□□□ -0.35
HIF3A-202ENST00000244303 ALX4Q9H161 411 aaPredicted RBP12.85□□□□□ -0.35
HIF3A-202ENST00000244303 SCPEP1Q9HB40 452 aa12.85□□□□□ -0.35
HIF3A-202ENST00000244303 CENPMQ9NSP4 180 aa12.85□□□□□ -0.35
HIF3A-202ENST00000244303 MED11Q9P086 117 aa12.85□□□□□ -0.35
HIF3A-202ENST00000244303 UPB1Q9UBR1 384 aa12.85□□□□□ -0.35
HIF3A-202ENST00000244303 AQP8O94778 261 aa12.84□□□□□ -0.35
HIF3A-202ENST00000244303 PMS2P2O95744 297 aa12.84□□□□□ -0.35
HIF3A-202ENST00000244303 CYB5AP00167 134 aa12.84□□□□□ -0.35
HIF3A-202ENST00000244303 SORDQ00796 357 aa12.84□□□□□ -0.35
HIF3A-202ENST00000244303 TLE3Q04726 772 aa12.84□□□□□ -0.35
HIF3A-202ENST00000244303 NR0B2Q15466 257 aa12.84□□□□□ -0.35
HIF3A-202ENST00000244303 ZNF704Q6ZNC4 412 aaPredicted RBP12.84□□□□□ -0.35
HIF3A-202ENST00000244303 MFSD8Q8NHS3 518 aa12.84□□□□□ -0.35
HIF3A-202ENST00000244303 CCDC107Q8WV48 283 aa12.84□□□□□ -0.35
HIF3A-202ENST00000244303 NKD1Q969G9 470 aa12.84□□□□□ -0.35
HIF3A-202ENST00000244303 KLK13Q9UKR3 277 aa12.84□□□□□ -0.35
HIF3A-202ENST00000244303 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 LOC390937A0A1W2PQ73 354 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 TMEM235A6NFC5 223 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 SHISA8B8ZZ34 492 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 KRBOX1C9JBD0 128 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 H3BUI4 141 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 B3GALNT1O75752 331 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 NMBP08949 121 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 H2BFMP0C1H6 154 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 ZNF735P0CB33 412 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 ZNF28P17035 718 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 HSF1Q00613 529 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 C17orf67Q0P5P2 114 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 C1orf100Q5SVJ3 147 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 TMEM244Q5VVB8 128 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 B3GNTL1Q67FW5 361 aaPredicted RBP12.83□□□□□ -0.35
HIF3A-202ENST00000244303 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.83□□□□□ -0.35
HIF3A-202ENST00000244303 CDH26Q8IXH8 852 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 ESX1Q8N693 406 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 ACBD4Q8NC06 268 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 OR6S1Q8NH40 331 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 SLC25A21Q9BQT8 299 aaPredicted RBP12.83□□□□□ -0.35
HIF3A-202ENST00000244303 B3GNT4Q9C0J1 378 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 SLC7A5P2Q9GIP4 190 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 FARSAQ9Y285 508 aaKnown RBP12.83□□□□□ -0.35
HIF3A-202ENST00000244303 RHBDD3Q9Y3P4 386 aa12.83□□□□□ -0.35
HIF3A-202ENST00000244303 ZNF736B4DX44 427 aaPredicted RBP12.83□□□□□ -0.36
HIF3A-202ENST00000244303 H3BML4 177 aa12.83□□□□□ -0.36
HIF3A-202ENST00000244303 TEX46H3BTG2 121 aa12.83□□□□□ -0.36
HIF3A-202ENST00000244303 UBCP0CG48 685 aaKnown RBP12.83□□□□□ -0.36
HIF3A-202ENST00000244303 APOBEC1P41238 236 aaKnown RBP12.83□□□□□ -0.36
HIF3A-202ENST00000244303 EIF1AXP47813 144 aaKnown RBP12.83□□□□□ -0.36
HIF3A-202ENST00000244303 GMFBP60983 142 aa12.83□□□□□ -0.36
HIF3A-202ENST00000244303 FOXF1Q12946 379 aa12.83□□□□□ -0.36
HIF3A-202ENST00000244303 RGS7BPQ6MZT1 257 aaPredicted RBP12.83□□□□□ -0.36
HIF3A-202ENST00000244303 GSG1LQ6UXU4 331 aa12.83□□□□□ -0.36
HIF3A-202ENST00000244303 LYPD6Q86Y78 171 aa12.83□□□□□ -0.36
HIF3A-202ENST00000244303 BPIFB2Q8N4F0 458 aa12.83□□□□□ -0.36
HIF3A-202ENST00000244303 C12orf45Q8N5I9 185 aaPredicted RBP12.83□□□□□ -0.36
HIF3A-202ENST00000244303 OR1J2Q8NGS2 313 aa12.83□□□□□ -0.36
HIF3A-202ENST00000244303 SCARB1Q8WTV0 552 aa12.83□□□□□ -0.36
HIF3A-202ENST00000244303 C5orf34Q96MH7 638 aa12.83□□□□□ -0.36
HIF3A-202ENST00000244303 EMC6Q9BV81 110 aa12.83□□□□□ -0.36
HIF3A-202ENST00000244303 SLCO5A1Q9H2Y9 848 aa12.83□□□□□ -0.36
HIF3A-202ENST00000244303 ZNF768Q9H5H4 540 aaKnown RBP12.83□□□□□ -0.36
HIF3A-202ENST00000244303 CHST11Q9NPF2 352 aa12.83□□□□□ -0.36
HIF3A-202ENST00000244303 HRH3Q9Y5N1 445 aa12.83□□□□□ -0.36
HIF3A-202ENST00000244303 TRIOBPQ9H2D6 2365 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 A0A0A6YYH2 397 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 A6NJ64 397 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 LGALS8O00214 317 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 NUPL2O15504 423 aaKnown RBP12.82□□□□□ -0.36
HIF3A-202ENST00000244303 CSN2P05814 226 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 SCGB2B2Q4G0G5 96 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 LY6G6FQ5SQ64 297 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 ATPAF1Q5TC12 328 aaPredicted RBP12.82□□□□□ -0.36
HIF3A-202ENST00000244303 DEGS2Q6QHC5 323 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 ANKRD37Q7Z713 158 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 NKAIN3Q8N8D7 197 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 OR4S1Q8NGB4 309 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 RNF133Q8WVZ7 376 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 FGGYQ96C11 551 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 DDIT4LQ96D03 193 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 MS4A7Q9GZW8 240 aaPredicted RBP12.82□□□□□ -0.36
HIF3A-202ENST00000244303 CNTD2Q9H8S5 307 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 GDF2Q9UK05 429 aaPredicted RBP12.82□□□□□ -0.36
HIF3A-202ENST00000244303 FBXO4Q9UKT5 387 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 SIT1Q9Y3P8 196 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 WIPF3A6NGB9 483 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 CD74P04233 296 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 IL32P24001 234 aa12.82□□□□□ -0.36
HIF3A-202ENST00000244303 GK2Q14410 553 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms