RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 SFXN2Q96NB2 322 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 SIGLEC12Q96PQ1 595 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 SF3B5Q9BWJ5 86 aaKnown RBP16.35■□□□□ 0.21
HOXC11-201ENST00000243082 OR2B2Q9GZK3 357 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 FOXD3Q9UJU5 478 aaPredicted RBP16.35■□□□□ 0.21
HOXC11-201ENST00000243082 CENPXA8MT69 81 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 STMND1H3BQB6 276 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 CARD18P57730 90 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 TAS2R20P59543 309 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 PSMA6P60900 246 aaKnown RBP16.35■□□□□ 0.21
HOXC11-201ENST00000243082 LSM6P62312 80 aaKnown RBP16.35■□□□□ 0.21
HOXC11-201ENST00000243082 DYRK1AQ13627 763 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 SGCAQ16586 387 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 TBRG1Q3YBR2 411 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 ABHD17BQ5VST6 288 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 GLT8D1Q68CQ7 371 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 FOXL2NBQ6ZUU3 175 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 BIVMQ86UB2 503 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 ZNF416Q9BWM5 594 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 NIPAL2Q9H841 368 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 PARD6AQ9NPB6 346 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 ZNF275Q9NSD4 429 aaPredicted RBP16.35■□□□□ 0.21
HOXC11-201ENST00000243082 ZNF221Q9UK13 617 aa16.35■□□□□ 0.21
HOXC11-201ENST00000243082 KIAA1549Q9HCM3 1950 aa16.34■□□□□ 0.21
HOXC11-201ENST00000243082 CNTRLQ7Z7A1 2325 aa16.34■□□□□ 0.21
HOXC11-201ENST00000243082 PTHLHP12272 177 aa16.34■□□□□ 0.21
HOXC11-201ENST00000243082 GDF1P27539 372 aa16.34■□□□□ 0.21
HOXC11-201ENST00000243082 HSD11B1P28845 292 aa16.34■□□□□ 0.21
HOXC11-201ENST00000243082 CLDN15P56746 228 aa16.34■□□□□ 0.21
HOXC11-201ENST00000243082 ANKRD16Q6P6B7 361 aa16.34■□□□□ 0.21
HOXC11-201ENST00000243082 KCNK15Q9H427 330 aa16.34■□□□□ 0.21
HOXC11-201ENST00000243082 CDV3Q9UKY7 258 aaKnown RBP16.34■□□□□ 0.21
HOXC11-201ENST00000243082 RBMX2Q9Y388 322 aaKnown RBP16.34■□□□□ 0.21
HOXC11-201ENST00000243082 LOC100289279A0A1B0GTE1 492 aa16.33■□□□□ 0.21
HOXC11-201ENST00000243082 MEGF11A6BM72 1044 aa16.33■□□□□ 0.21
HOXC11-201ENST00000243082 A8MV72 311 aaPredicted RBP16.33■□□□□ 0.21
HOXC11-201ENST00000243082 XRCC3O43542 346 aa16.33■□□□□ 0.21
HOXC11-201ENST00000243082 TPPPO94811 219 aa16.33■□□□□ 0.21
HOXC11-201ENST00000243082 GLSO94925 669 aaPredicted RBP16.33■□□□□ 0.21
HOXC11-201ENST00000243082 MSR1P21757 451 aa16.33■□□□□ 0.21
HOXC11-201ENST00000243082 PRKXP51817 358 aa16.33■□□□□ 0.21
HOXC11-201ENST00000243082 GFRA1P56159 465 aa16.33■□□□□ 0.21
HOXC11-201ENST00000243082 BTG1P62324 171 aa16.33■□□□□ 0.21
HOXC11-201ENST00000243082 SPOCK1Q08629 439 aa16.33■□□□□ 0.21
HOXC11-201ENST00000243082 GLRX5Q86SX6 157 aa16.33■□□□□ 0.21
HOXC11-201ENST00000243082 LYPD6Q86Y78 171 aa16.33■□□□□ 0.21
HOXC11-201ENST00000243082 NABP1Q96AH0 204 aa16.33■□□□□ 0.21
HOXC11-201ENST00000243082 FGGYQ96C11 551 aa16.33■□□□□ 0.21
HOXC11-201ENST00000243082 C7orf50Q9BRJ6 194 aaKnown RBP16.33■□□□□ 0.21
HOXC11-201ENST00000243082 DPAGT1Q9H3H5 408 aa16.33■□□□□ 0.21
HOXC11-201ENST00000243082 NELFAQ9H3P2 528 aa16.33■□□□□ 0.21
HOXC11-201ENST00000243082 A0A1B0GTI1 187 aa16.33■□□□□ 0.2
HOXC11-201ENST00000243082 DHHO43323 396 aa16.33■□□□□ 0.2
HOXC11-201ENST00000243082 CXCL13O43927 109 aa16.33■□□□□ 0.2
HOXC11-201ENST00000243082 CTAG2O75638 210 aa16.33■□□□□ 0.2
HOXC11-201ENST00000243082 KRT33AO76009 404 aa16.33■□□□□ 0.2
HOXC11-201ENST00000243082 ITGA3P26006 1051 aa16.33■□□□□ 0.2
HOXC11-201ENST00000243082 NTF4P34130 210 aa16.33■□□□□ 0.2
HOXC11-201ENST00000243082 NKX2-5P52952 324 aaPredicted RBP16.33■□□□□ 0.2
HOXC11-201ENST00000243082 RAB25P57735 213 aa16.33■□□□□ 0.2
HOXC11-201ENST00000243082 MRPS10P82664 201 aaKnown RBP16.33■□□□□ 0.2
HOXC11-201ENST00000243082 CBX3Q13185 183 aa16.33■□□□□ 0.2
HOXC11-201ENST00000243082 SNTB2Q13425 540 aaKnown RBP16.33■□□□□ 0.2
HOXC11-201ENST00000243082 TAF13Q15543 124 aa16.33■□□□□ 0.2
HOXC11-201ENST00000243082 GLYATL3Q5SZD4 288 aa16.33■□□□□ 0.2
HOXC11-201ENST00000243082 DNM1P46Q6ZS02 220 aa16.33■□□□□ 0.2
HOXC11-201ENST00000243082 C20orf196Q8IYI0 205 aa16.33■□□□□ 0.2
HOXC11-201ENST00000243082 OR2M7Q8NG81 312 aa16.33■□□□□ 0.2
HOXC11-201ENST00000243082 FCAMRQ8WWV6 532 aa16.33■□□□□ 0.2
HOXC11-201ENST00000243082 NKD1Q969G9 470 aa16.33■□□□□ 0.2
HOXC11-201ENST00000243082 ZNF775Q96BV0 537 aaPredicted RBP16.33■□□□□ 0.2
HOXC11-201ENST00000243082 INTS12Q96CB8 462 aaKnown RBP16.33■□□□□ 0.2
HOXC11-201ENST00000243082 FAM173AQ9BQD7 235 aa16.33■□□□□ 0.2
HOXC11-201ENST00000243082 MOB1AQ9H8S9 216 aa16.33■□□□□ 0.2
HOXC11-201ENST00000243082 KLK11Q9UBX7 282 aa16.33■□□□□ 0.2
HOXC11-201ENST00000243082 CGGBP1Q9UFW8 167 aaPredicted RBP16.33■□□□□ 0.2
HOXC11-201ENST00000243082 POU2F3Q9UKI9 436 aa16.33■□□□□ 0.2
HOXC11-201ENST00000243082 BOKQ9UMX3 212 aaPredicted RBP16.33■□□□□ 0.2
HOXC11-201ENST00000243082 TMEM272A0A1B0GTI8 110 aa16.32■□□□□ 0.2
HOXC11-201ENST00000243082 DCDC2BA2VCK2 349 aa16.32■□□□□ 0.2
HOXC11-201ENST00000243082 ZNF716A6NP11 495 aa16.32■□□□□ 0.2
HOXC11-201ENST00000243082 SYT7O43581 403 aa16.32■□□□□ 0.2
HOXC11-201ENST00000243082 MT-ND4P03905 459 aa16.32■□□□□ 0.2
HOXC11-201ENST00000243082 ARSBP15848 533 aa16.32■□□□□ 0.2
HOXC11-201ENST00000243082 ANOS1P23352 680 aa16.32■□□□□ 0.2
HOXC11-201ENST00000243082 GIFP27352 417 aa16.32■□□□□ 0.2
HOXC11-201ENST00000243082 HTR2CP28335 458 aa16.32■□□□□ 0.2
HOXC11-201ENST00000243082 ENDOGQ14249 297 aaKnown RBP16.32■□□□□ 0.2
HOXC11-201ENST00000243082 KCNJ8Q15842 424 aa16.32■□□□□ 0.2
HOXC11-201ENST00000243082 CSRP2Q16527 193 aa16.32■□□□□ 0.2
HOXC11-201ENST00000243082 OR10D3Q8NH80 312 aa16.32■□□□□ 0.2
HOXC11-201ENST00000243082 OR2V1Q8NHB1 315 aa16.32■□□□□ 0.2
HOXC11-201ENST00000243082 C15orf40Q8WUR7 153 aa16.32■□□□□ 0.2
HOXC11-201ENST00000243082 UTP23Q9BRU9 249 aaKnown RBP16.32■□□□□ 0.2
HOXC11-201ENST00000243082 B3GNT4Q9C0J1 378 aa16.32■□□□□ 0.2
HOXC11-201ENST00000243082 MRPL15Q9P015 296 aaKnown RBP16.32■□□□□ 0.2
HOXC11-201ENST00000243082 FLVCR1Q9Y5Y0 555 aa16.32■□□□□ 0.2
HOXC11-201ENST00000243082 LOC390937A0A1W2PQ73 354 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 TCRBP04435 133 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 SLC2A1P11166 492 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms