RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 ZNF519Q8TB69 540 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 RNF141Q8WVD5 230 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 SLC25A36Q96CQ1 311 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 FAHD2AQ96GK7 314 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 CNTNAP3BQ96NU0 1288 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 RNF126Q9BV68 326 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 CYTL1Q9NRR1 136 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 EMC9Q9Y3B6 208 aa13.9□□□□□ -0.18
DDX55-201ENST00000238146 C13orf42A0A1B0GVH6 325 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 PQLC2LA1A4F0 135 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 C5orf51A6NDU8 294 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 SRSF10O75494 262 aaKnown RBP13.89□□□□□ -0.19
DDX55-201ENST00000238146 DUS4LO95620 317 aaKnown RBP13.89□□□□□ -0.19
DDX55-201ENST00000238146 CXCR1P25024 350 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 HRH1P35367 487 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 OR1M1Q8NGA1 313 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 NUDCD2Q8WVJ2 157 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 TMED6Q8WW62 240 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 DCUN1D4Q92564 292 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 RRNAD1Q96FB5 475 aaKnown RBP13.89□□□□□ -0.19
DDX55-201ENST00000238146 ZC3H10Q96K80 434 aaKnown RBP13.89□□□□□ -0.19
DDX55-201ENST00000238146 NXF5Q9H1B4 397 aaKnown RBP13.89□□□□□ -0.19
DDX55-201ENST00000238146 TCEAL2Q9H3H9 227 aaPredicted RBP13.89□□□□□ -0.19
DDX55-201ENST00000238146 TMEM231Q9H6L2 316 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 FN3KRPQ9HA64 309 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 TRBV6-7A0A0A0MS04 114 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 LOC107986453A0A1B0GWG9 222 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 METTL21EPA6NDL7 271 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 DBX1A6NMT0 343 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 MPZL1O95297 269 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 ATXN8OSP0DMR3 200 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 HOXB1P14653 301 aaPredicted RBP13.89□□□□□ -0.19
DDX55-201ENST00000238146 RAB6AP20340 208 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 SERPINF1P36955 418 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 NAAAQ02083 359 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 NKAPLQ5M9Q1 402 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 GLYATL2Q8WU03 294 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 WBP1LQ9NX94 342 aa13.89□□□□□ -0.19
DDX55-201ENST00000238146 KNL1Q8NG31 2342 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 TRAV36DV7A0A075B6V5 113 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 A0A0B4J2A0 478 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 SNAPINO95295 136 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 FAM157CP0CG43 387 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 SPP1P10451 314 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 ZNF117Q03924 483 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 AIMP2Q13155 320 aaKnown RBP13.88□□□□□ -0.19
DDX55-201ENST00000238146 TMPPEQ6ZT21 453 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 METTL27Q8N6F8 245 aaPredicted RBP13.88□□□□□ -0.19
DDX55-201ENST00000238146 CHST4Q8NCG5 386 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 OR52N5Q8NH56 324 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 ELP5Q8TE02 316 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 ADOQ96SZ5 270 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 CMSS1Q9BQ75 279 aaKnown RBP13.88□□□□□ -0.19
DDX55-201ENST00000238146 TREM1Q9NP99 234 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 G6PC2Q9NQR9 355 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 VSX1Q9NZR4 365 aaPredicted RBP13.88□□□□□ -0.19
DDX55-201ENST00000238146 SHPKQ9UHJ6 478 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 RAB22AQ9UL26 194 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 R4GMQ9 66 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 FREM3P0C091 2139 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 OR5K4A6NMS3 321 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 CRYBA1P05813 215 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 CELA2BP08218 269 aaPredicted RBP13.88□□□□□ -0.19
DDX55-201ENST00000238146 HNRNPA2B1P22626 353 aaKnown RBP13.88□□□□□ -0.19
DDX55-201ENST00000238146 GPM6BQ13491 265 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 TMEM31Q5JXX7 168 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 MAMDC2Q7Z304 686 aaPredicted RBP13.88□□□□□ -0.19
DDX55-201ENST00000238146 C19orf47Q8N9M1 422 aaKnown RBP13.88□□□□□ -0.19
DDX55-201ENST00000238146 ZSCAN4Q8NAM6 433 aaPredicted RBP13.88□□□□□ -0.19
DDX55-201ENST00000238146 GABRG3Q99928 467 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 SEC11CQ9BY50 192 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 LAT2Q9GZY6 243 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 CNTD2Q9H8S5 307 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 ZFP57Q9NU63 452 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 UQCC1Q9NVA1 299 aa13.88□□□□□ -0.19
DDX55-201ENST00000238146 C17orf105B2RV13 164 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 C5orf67F2Z3F1 127 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 H0YIZ8 118 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 HCRTR2O43614 444 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 HOXB2P14652 356 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 TNFRSF4P43489 277 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 MEOX2P50222 304 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 TFF2Q03403 129 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 UNC119Q13432 240 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 SGCBQ16585 318 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 PNLIPRP3Q17RR3 467 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 MST1LQ2TV78 715 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 PGAP1Q75T13 922 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 PRR22Q8IZ63 422 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 ACKR4Q9NPB9 350 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 MMP26Q9NRE1 261 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 MEX3AA1L020 520 aaKnown RBP13.87□□□□□ -0.19
DDX55-201ENST00000238146 NUDT19A8MXV4 375 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 MYOGP15173 224 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 KCNJ3P48549 501 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 NKAIN3Q8N8D7 197 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 C2CD4CQ8TF44 421 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 HERVK_113Q902F9 699 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 RELTQ969Z4 430 aa13.87□□□□□ -0.19
DDX55-201ENST00000238146 FAM46BQ96A09 425 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms