RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 OR2T2Q6IF00 324 aa13.16□□□□□ -0.3
NME3-201ENST00000219302 C1orf94Q6P1W5 598 aa13.16□□□□□ -0.3
NME3-201ENST00000219302 BTNL3Q6UXE8 466 aa13.16□□□□□ -0.3
NME3-201ENST00000219302 VTCN1Q7Z7D3 282 aa13.16□□□□□ -0.3
NME3-201ENST00000219302 OR13G1Q8NGZ3 307 aa13.16□□□□□ -0.3
NME3-201ENST00000219302 OR1F12Q8NHA8 337 aa13.16□□□□□ -0.3
NME3-201ENST00000219302 ACOT11Q8WXI4 607 aaPredicted RBP13.16□□□□□ -0.3
NME3-201ENST00000219302 FNDC11Q9BVV2 318 aa13.16□□□□□ -0.3
NME3-201ENST00000219302 NOTCH1P46531 2555 aa13.15□□□□□ -0.3
NME3-201ENST00000219302 TRAV40A0A0B4J280 105 aa13.15□□□□□ -0.3
NME3-201ENST00000219302 A0A1B0GWJ7 208 aa13.15□□□□□ -0.3
NME3-201ENST00000219302 IMPA2O14732 288 aa13.15□□□□□ -0.3
NME3-201ENST00000219302 RER1O15258 196 aa13.15□□□□□ -0.3
NME3-201ENST00000219302 MLNRO43193 412 aa13.15□□□□□ -0.3
NME3-201ENST00000219302 PTP4A3O75365 173 aa13.15□□□□□ -0.3
NME3-201ENST00000219302 RPS2P15880 293 aaKnown RBP13.15□□□□□ -0.3
NME3-201ENST00000219302 RPL4P36578 427 aaKnown RBP13.15□□□□□ -0.3
NME3-201ENST00000219302 RGS6P49758 472 aa13.15□□□□□ -0.3
NME3-201ENST00000219302 KLF10Q13118 480 aa13.15□□□□□ -0.3
NME3-201ENST00000219302 RSPO1Q2MKA7 263 aaPredicted RBP13.15□□□□□ -0.3
NME3-201ENST00000219302 DEFB112Q30KQ8 113 aa13.15□□□□□ -0.3
NME3-201ENST00000219302 ZNF404Q494X3 552 aa13.15□□□□□ -0.3
NME3-201ENST00000219302 ZBED5Q49AG3 693 aa13.15□□□□□ -0.3
NME3-201ENST00000219302 MBOAT2Q6ZWT7 520 aa13.15□□□□□ -0.3
NME3-201ENST00000219302 OR2T12Q8NG77 320 aa13.15□□□□□ -0.3
NME3-201ENST00000219302 OR10AD1Q8NGE0 317 aa13.15□□□□□ -0.3
NME3-201ENST00000219302 RASD2Q96D21 266 aa13.15□□□□□ -0.3
NME3-201ENST00000219302 NEIL1Q96FI4 390 aaPredicted RBP13.15□□□□□ -0.3
NME3-201ENST00000219302 PLEKHA8Q96JA3 519 aa13.15□□□□□ -0.3
NME3-201ENST00000219302 SLC30A2Q9BRI3 323 aa13.15□□□□□ -0.3
NME3-201ENST00000219302 NMNAT1Q9HAN9 279 aaPredicted RBP13.15□□□□□ -0.3
NME3-201ENST00000219302 PTTG3PQ9NZH4 202 aa13.15□□□□□ -0.3
NME3-201ENST00000219302 ASH2LQ9UBL3 628 aa13.15□□□□□ -0.3
NME3-201ENST00000219302 ATPIF1Q9UII2 106 aa13.15□□□□□ -0.3
NME3-201ENST00000219302 COA3Q9Y2R0 106 aaPredicted RBP13.15□□□□□ -0.3
NME3-201ENST00000219302 ELOVL7A1L3X0 281 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 BBIP1A8MTZ0 92 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 XKRYO14609 159 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 HOXA3O43365 443 aaPredicted RBP13.14□□□□□ -0.31
NME3-201ENST00000219302 SLC16A7O60669 478 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 KHDRBS3O75525 346 aaKnown RBP13.14□□□□□ -0.31
NME3-201ENST00000219302 GPR4P46093 362 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 SRP9P49458 86 aaKnown RBP13.14□□□□□ -0.31
NME3-201ENST00000219302 HIST1H3AP68431 136 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 SRSF4Q08170 494 aaKnown RBP13.14□□□□□ -0.31
NME3-201ENST00000219302 KCNMB1Q16558 191 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 MIDNQ504T8 468 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 FAM201AQ5SY85 155 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 HIST2H3PS2Q5TEC6 136 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 ZNF730Q6ZMV8 503 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 ZNF841Q6ZN19 808 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 HIST2H3AQ71DI3 136 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 SPATC1Q76KD6 591 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 TSEN54Q7Z6J9 526 aaKnown RBP13.14□□□□□ -0.31
NME3-201ENST00000219302 MOGAT3Q86VF5 341 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 GLB1L2Q8IW92 636 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 FITM2Q8N6M3 262 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 OR5L1Q8NGL2 311 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 OR10S1Q8NGN2 331 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 ZNF582Q96NG8 517 aaPredicted RBP13.14□□□□□ -0.31
NME3-201ENST00000219302 TMEM120AQ9BXJ8 343 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 SYT4Q9H2B2 425 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 NRIP3Q9NQ35 241 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 SAR1AQ9NR31 198 aa13.14□□□□□ -0.31
NME3-201ENST00000219302 VSX1Q9NZR4 365 aaPredicted RBP13.14□□□□□ -0.31
NME3-201ENST00000219302 GMPR2Q9P2T1 348 aaKnown RBP13.14□□□□□ -0.31
NME3-201ENST00000219302 IGHV3-64DA0A0J9YX35 117 aa13.13□□□□□ -0.31
NME3-201ENST00000219302 LOC100653049A0A140TA62 436 aa13.13□□□□□ -0.31
NME3-201ENST00000219302 FAM181BA6NEQ2 426 aa13.13□□□□□ -0.31
NME3-201ENST00000219302 IQCF6A8MYZ5 107 aa13.13□□□□□ -0.31
NME3-201ENST00000219302 SRRM5B3KS81 715 aa13.13□□□□□ -0.31
NME3-201ENST00000219302 F5H5P2 479 aa13.13□□□□□ -0.31
NME3-201ENST00000219302 KRT34O76011 436 aa13.13□□□□□ -0.31
NME3-201ENST00000219302 IFNW1P05000 195 aa13.13□□□□□ -0.31
NME3-201ENST00000219302 RELBQ01201 579 aa13.13□□□□□ -0.31
NME3-201ENST00000219302 LYPD2Q6UXB3 125 aa13.13□□□□□ -0.31
NME3-201ENST00000219302 BRD3OSQ6XYD6 125 aa13.13□□□□□ -0.31
NME3-201ENST00000219302 Q6YL49 198 aa13.13□□□□□ -0.31
NME3-201ENST00000219302 COLCA1Q6ZS62 124 aa13.13□□□□□ -0.31
NME3-201ENST00000219302 LZICQ8WZA0 190 aa13.13□□□□□ -0.31
NME3-201ENST00000219302 APOBEC3DQ96AK3 386 aaPredicted RBP13.13□□□□□ -0.31
NME3-201ENST00000219302 ZNF570Q96NI8 536 aa13.13□□□□□ -0.31
NME3-201ENST00000219302 NUDT16L1Q9BRJ7 211 aaKnown RBP13.13□□□□□ -0.31
NME3-201ENST00000219302 NUAK2Q9H093 628 aa13.13□□□□□ -0.31
NME3-201ENST00000219302 GID8Q9NWU2 228 aa13.13□□□□□ -0.31
NME3-201ENST00000219302 CMTM6Q9NX76 183 aa13.13□□□□□ -0.31
NME3-201ENST00000219302 PDP1Q9P0J1 537 aaPredicted RBP13.13□□□□□ -0.31
NME3-201ENST00000219302 PRKDCP78527 4128 aaKnown RBP13.12□□□□□ -0.31
NME3-201ENST00000219302 A0A1B0GUS0 222 aa13.12□□□□□ -0.31
NME3-201ENST00000219302 HMGB1P1B2RPK0 211 aaPredicted RBP13.12□□□□□ -0.31
NME3-201ENST00000219302 SELEP16581 610 aa13.12□□□□□ -0.31
NME3-201ENST00000219302 SDHAP31040 664 aa13.12□□□□□ -0.31
NME3-201ENST00000219302 GATA4P43694 442 aa13.12□□□□□ -0.31
NME3-201ENST00000219302 PITPNBP48739 271 aa13.12□□□□□ -0.31
NME3-201ENST00000219302 BPIFB3P59826 476 aa13.12□□□□□ -0.31
NME3-201ENST00000219302 FGF12P61328 243 aa13.12□□□□□ -0.31
NME3-201ENST00000219302 MAB21L1Q13394 359 aa13.12□□□□□ -0.31
NME3-201ENST00000219302 KRR1Q13601 381 aaKnown RBP13.12□□□□□ -0.31
NME3-201ENST00000219302 ZNF362Q5T0B9 420 aaPredicted RBP13.12□□□□□ -0.31
NME3-201ENST00000219302 WDR25Q64LD2 544 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms