RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Drd3P30728 446 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Hnrnpa1P49312 320 aaKnown RBP11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Tpt1P63028 172 aaKnown RBP11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Adipor2Q8BQS5 386 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr1301Q8VGE7 312 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Cldn12Q9ET43 244 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Tas2r4Q9JKT3 297 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Sirpb1bA0A0A6YXN8 397 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 MiipA2A7Y5 387 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Sirpb1cK7N6K7 397 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gm3486L7N2D0 199 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Bmp8aP34821 399 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Bmp8bP55105 399 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr1166Q7TR27 316 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Egln1Q91YE3 400 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Nhp2Q9CRB2 153 aaKnown RBP11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Raet1eQ9CZQ6 251 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Pinx1Q9CZX5 332 aaKnown RBP11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr888Q9EQA5 314 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Vstm2bQ9JME9 285 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Ifna1P01572 189 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Sec24bQ80ZX0 1251 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Scp2d1Q9DAH1 156 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Btaf1E9QAE3 1848 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Vmn1r176G3UW31 304 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Psmb5O55234 264 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 AF067061O70616 171 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Kcnj15O88932 375 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Dnmt3cP0DOY1 709 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gpx5P21765 221 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Thbs1P35441 1170 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Art1Q60935 325 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Lair1Q8BG84 263 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Shisa4Q8CA71 197 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Scgb2b26Q8JZX1 112 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Q9CQ90 155 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Znrf4Q9DAH2 327 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Vmn1r44Q9EQ47 310 aa11.04□□□□□ -0.64
Trim56-201ENSMUST00000054384 Zfp934K7N6H3 473 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Rhox2hK7N6P1 191 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Stc2O88452 296 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr1386Q7TQT0 309 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Slc35a3Q8R1T4 326 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Tmem175Q9CXY1 499 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Slc46a3Q9DC26 460 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Kmt2eQ3UG20 1868 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr1089A0A1L1SRK6 311 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gm5093E9PZB3 174 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 8030474K03RikE9Q4Y8 554 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Rabl2E9Q9D5 223 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Rab3dP35276 219 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Itgb8Q0VBD0 767 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Obox7Q4KL20 218 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr1167Q7TR26 316 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Oraov1Q8CH62 137 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 SbsnQ8CIT9 700 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Vmn1r83Q8R287 306 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr1102Q8VES2 324 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Cnih4Q9CX13 139 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 PipoxQ9D826 390 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Tox2A2A472 547 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 1700003H04RikE9PXM2 192 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 PthlhP22858 175 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Cib3Q0P523 160 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Btn1a1Q62556 524 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr309Q7TS01 308 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Enkd1Q7TSV9 346 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 B4gat1Q8BWP8 415 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr1Q8VGI1 314 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 4933400A11RikQ9CR52 288 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Isl2Q9CXV0 359 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Rnf138rt1Q9D9M9 248 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Esp6A8R0U0 136 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Tgfbr3O88393 850 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Wnt11P48615 354 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Tex30Q3TUU5 225 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 CbarpQ66L44 698 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 SccpdhQ8R127 429 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr969Q8VG89 311 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Keg1Q9DCY0 295 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Jag1Q9QXX0 1218 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Gm29797A0A140LIA7 188 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Rdh16f1E9Q9P8 317 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Olfr597L7N224 315 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Mmp12P34960 473 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 HbegfQ06186 208 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Fzd7Q61090 572 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Ffar4Q7TMA4 361 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Kcnk15B2RVL1 343 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Sbk3P0C5K0 361 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 CtsaP16675 474 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Mettl7a2Q5I0W6 244 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Dcaf13Q6PAC3 445 aaKnown RBP11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Zfp9Q8BIS1 454 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Syt13Q9EQT6 426 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Neu3Q9JMH7 418 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Rhox7aA2A4F1 281 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Vmn1r122K7N726 305 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Asgr2P24721 301 aa11.03□□□□□ -0.64
Trim56-201ENSMUST00000054384 Tamm41Q3TUH1 337 aa11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms