RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Defb41Q30KP6 65 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 ArhgdibQ61599 200 aaKnown RBP9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Olfr728Q7TRM6 311 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Zfp819Q80V81 607 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Zfp3Q8BLB0 497 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Smco3Q8BQM7 225 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Flywch1Q8CI03 673 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Olfr307Q8VFN8 313 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Olfr1257Q8VGP0 309 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Btf3l4Q9CQH7 158 aaKnown RBP9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 PsenenQ9CQR7 101 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 P2ry14Q9ESG6 338 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 MeltfQ9R0R1 738 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Frem3Q5H8B9 2123 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Trbv23A0A0A6YWQ1 115 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Rpl7a-ps5A0A140T8L3 268 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Trabd2bB1ATG9 517 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Rd3lB2RV38 197 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Gm5901D3YVJ1 333 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 HpnO35453 436 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 EhfO70273 300 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 CtslP06797 334 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 LhcgrP30730 700 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Arf3P61205 181 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Arf1P84078 181 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 InhbbQ04999 411 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Dtx3lQ3UIR3 748 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Slc30a10Q3UVU3 470 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Ifna15Q61718 190 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Gramd2bQ6PEM6 445 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Fam212bQ80VY2 300 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Tbl1xr1Q8BHJ5 514 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Ska3Q8C263 411 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 AmtQ8CFA2 403 aaKnown RBP9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Slc35b4Q8CIA5 331 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Cmtm4Q8CJ61 208 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Alkbh3Q8K1E6 286 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Olfr780Q8VEU0 312 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Olfr1163Q8VFR4 316 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 PsphQ99LS3 225 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Nudt21Q9CQF3 227 aaKnown RBP9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Tomm40lQ9CZR3 308 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Vmn1r53Q9EP93 310 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 MyotQ9JIF9 496 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 TriobpQ99KW3 2014 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Olfr623E9Q382 317 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Olfr608E9Q564 316 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Olfr893K7N678 312 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Emp3O35912 163 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Jmjd7P0C872 316 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Prph2P15499 346 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Hrh3P58406 445 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Stard6P59096 233 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Rps15P62843 145 aaKnown RBP9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Idh3gP70404 393 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Surf4Q64310 269 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Wdr48Q8BH57 676 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Tspan12Q8BKT6 305 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Dync2li1Q8K0T2 351 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Olfr656Q8VGX9 329 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Slc33a1Q99J27 550 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Q9CQT6 229 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Scamp2Q9ERN0 329 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 HpgdsQ9JHF7 199 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Serinc1Q9QZI8 453 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 MvkQ9R008 395 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 HgfacQ9R098 653 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Baz2bA2AUY4 2123 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Urb1Q571H0 2274 aaKnown RBP9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Rpl23a-ps3A0A140T8M7 156 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Gm11634A0A1B0GSX1 172 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Adap1E9PY16 374 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Zfp160E9Q459 650 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Olfr597L7N224 315 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Ppp2cbP62715 309 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Rpl23aP62751 156 aaKnown RBP9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Ppp2caP63330 309 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 FuzQ3UYI6 415 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Tas2r120Q7M721 295 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Cdk5rap1Q8BTW8 588 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Mef2cQ8CFN5 474 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Olfr1497Q8VG11 314 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Dyrk3Q922Y0 586 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Bex4Q9CWT2 118 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Zc3h8Q9JJ48 305 aaKnown RBP9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 TollipQ9QZ06 274 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 SpdefQ9WTP3 325 aa9.12□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Gm8225D3Z536 292 aa9.11□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Stc2O88452 296 aa9.11□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Fpr1P33766 364 aa9.11□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Rab6aP35279 208 aaKnown RBP9.11□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Gfi1P70338 423 aa9.11□□□□□ -0.95
Ldlr-201ENSMUST00000034713 2410002F23RikQ3TE80 284 aa9.11□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Mfsd12Q3U481 476 aa9.11□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Lyg2Q3V1I0 213 aa9.11□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Defb28Q3V2L0 89 aa9.11□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Gpr39Q5U431 456 aa9.11□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Olfr146Q60884 306 aa9.11□□□□□ -0.95
Ldlr-201ENSMUST00000034713 Irf2bplQ8K3X4 775 aa9.11□□□□□ -0.95
Ldlr-201ENSMUST00000034713 NifkQ91VE6 317 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 53.1 ms