RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 CD37P11049 281 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 FASLGP48023 281 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 FOXL2P58012 376 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 SSBP1Q04837 148 aaKnown RBP12.39□□□□□ -0.43
PHGDH-233ENST00000642021 FMODQ06828 376 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 LRRC37A5PQ49AS3 106 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 BEX5Q5H9J7 111 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 KCTD18Q6PI47 426 aaPredicted RBP12.39□□□□□ -0.43
PHGDH-233ENST00000642021 CD163Q86VB7 1156 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 LINC00346Q8IVM7 164 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 BEST3Q8N1M1 668 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 BPIFB2Q8N4F0 458 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 TBL1XR1Q9BZK7 514 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 PDE7BQ9NP56 450 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 CKLFQ9UBR5 152 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 TMED7Q9Y3B3 224 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 LOC100509620A0A075B734 347 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 OR5H14A6NHG9 310 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 PLPP3O14495 311 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 CD2P06729 351 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 GP1BBP13224 206 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 ZMYND11Q15326 602 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 SLC22A6Q4U2R8 563 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 C1orf140Q5VVS0 124 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 CFAP77Q6ZQR2 320 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 ACBD4Q8NC06 268 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 OR52H1Q8NGJ2 320 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 OR52N5Q8NH56 324 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 ST8SIA2Q92186 375 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 NKD1Q969G9 470 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 CMBLQ96DG6 245 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 MRPL38Q96DV4 380 aaKnown RBP12.39□□□□□ -0.43
PHGDH-233ENST00000642021 SLC25A21Q9BQT8 299 aaPredicted RBP12.39□□□□□ -0.43
PHGDH-233ENST00000642021 G6PC2Q9NQR9 355 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 CUTCQ9NTM9 273 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 THADAQ6YHU6 1953 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 KIF26BQ2KJY2 2108 aa12.39□□□□□ -0.43
PHGDH-233ENST00000642021 IGKV1D-43A0A0B4J1Z2 117 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 ZNF736B4DX44 427 aaPredicted RBP12.38□□□□□ -0.43
PHGDH-233ENST00000642021 SULT1C2O00338 296 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 BLKP51451 505 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 CCR5P51681 352 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 LIN54Q6MZP7 749 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 ZNF704Q6ZNC4 412 aaPredicted RBP12.38□□□□□ -0.43
PHGDH-233ENST00000642021 LYPD6Q86Y78 171 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 GPR119Q8TDV5 335 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 CCDC107Q8WV48 283 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 OIT3Q8WWZ8 545 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 THRSPQ92748 146 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 MRGPRFQ96AM1 343 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 EDEM2Q9BV94 578 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 MRTO4Q9UKD2 239 aaKnown RBP12.38□□□□□ -0.43
PHGDH-233ENST00000642021 MKL2Q9ULH7 1088 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 VSIG4Q9Y279 399 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 RHBDD3Q9Y3P4 386 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 A0A1B0GTI1 187 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 LOC107986453A0A1B0GWG9 222 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 A0A1W2PPC4 97 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 H3BMH7 237 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 CYB5AP00167 134 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 MT-ATP6P00846 226 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 CD74P04233 296 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 PGCP20142 388 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 ABCD3P28288 659 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 ARHGDIBP52566 201 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 PLCXD2Q0VAA5 305 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 TOMM20Q15388 145 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 C16orf47Q6ZP98 133 aaPredicted RBP12.38□□□□□ -0.43
PHGDH-233ENST00000642021 ADGRE4PQ86SQ3 457 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 RTN4RL2Q86UN3 420 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 GVQW1Q8N7I0 195 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 OR5M8Q8NGP6 311 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 OR13C3Q8NGS6 347 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 LMX1AQ8TE12 382 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 ZNF75AQ96N20 296 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 LDAHQ9H6V9 325 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 UPB1Q9UBR1 384 aa12.38□□□□□ -0.43
PHGDH-233ENST00000642021 C2orf72A6NCS6 295 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 OR14I1A6ND48 311 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 SOX1O00570 391 aaPredicted RBP12.37□□□□□ -0.43
PHGDH-233ENST00000642021 CD8AP01732 235 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 APOC3P02656 99 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 FSTP19883 344 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 DNASE1L1P49184 302 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 JMJD6Q6NYC1 403 aaPredicted RBP12.37□□□□□ -0.43
PHGDH-233ENST00000642021 C3orf33Q6P1S2 294 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 DCXRQ7Z4W1 244 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 EIF4E3Q8N5X7 224 aaKnown RBP12.37□□□□□ -0.43
PHGDH-233ENST00000642021 ARL6IP6Q8N6S5 226 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 TMEM185BQ9H7F4 350 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 HHLA2Q9UM44 414 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 R4GMQ9 66 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 CFAP54Q96N23 3096 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 A8MVM7 634 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 MGMTP16455 207 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 GLO1Q04760 184 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 ATXN7L3Q14CW9 347 aaPredicted RBP12.37□□□□□ -0.43
PHGDH-233ENST00000642021 TAF13Q15543 124 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 NSDHLQ15738 373 aa12.37□□□□□ -0.43
PHGDH-233ENST00000642021 OR52W1Q6IF63 320 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms