RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 IRF3Q14653 427 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 MED22Q15528 200 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 PABPC1L2AQ5JQF8 200 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 PLEKHG7Q6ZR37 379 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 KCTD8Q6ZWB6 473 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 DPPA2Q7Z7J5 298 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 ALDH16A1Q8IZ83 802 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 NANOGP1Q8N7R0 232 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 YIPF7Q8N8F6 280 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 GATAD2BQ8WXI9 593 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 ZNF649Q9BS31 505 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 ISG20L2Q9H9L3 353 aaKnown RBP15.25■□□□□ 0.03
PHGDH-230ENST00000641927 ELOVL3Q9HB03 270 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 NOX3Q9HBY0 568 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 CAB39Q9Y376 341 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-230ENST00000641927 NCOA6Q14686 2063 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-230ENST00000641927 HIVEP3Q5T1R4 2406 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 ZNF878C9JN71 531 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 AGFG2O95081 481 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 PTHP01270 115 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 SMIM18P0DKX4 95 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 HOXB1P14653 301 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-230ENST00000641927 HIST1H3AP68431 136 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 PLP2Q04941 152 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 RAB35Q15286 201 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 NEDD8Q15843 81 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 CDONQ4KMG0 1287 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 CCDC92Q53HC0 331 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-230ENST00000641927 ELFN2Q5R3F8 820 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 HIST2H3PS2Q5TEC6 136 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 RNLSQ5VYX0 342 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 XKRXQ6PP77 449 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 HIST2H3AQ71DI3 136 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 MDP1Q86V88 176 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 WDR31Q8NA23 367 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 OR10S1Q8NGN2 331 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 RNF133Q8WVZ7 376 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 SPRYD4Q8WW59 207 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-230ENST00000641927 ITLN2Q8WWU7 325 aaPredicted RBP15.25■□□□□ 0.03
PHGDH-230ENST00000641927 MUCL1Q96DR8 90 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 OR8B4Q96RC9 309 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 ATF6BQ99941 703 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 C1QTNF6Q9BXI9 259 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 WNT5BQ9H1J7 359 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 VCX3AQ9NNX9 186 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 ACOT13Q9NPJ3 140 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 AMDHD2Q9Y303 409 aa15.25■□□□□ 0.03
PHGDH-230ENST00000641927 ARPC4-TTLL3A0A0A6YYG9 625 aa15.24■□□□□ 0.03
PHGDH-230ENST00000641927 TMEM129A0AVI4 362 aa15.24■□□□□ 0.03
PHGDH-230ENST00000641927 METTL15A6NJ78 407 aa15.24■□□□□ 0.03
PHGDH-230ENST00000641927 MT-ND5P03915 603 aa15.24■□□□□ 0.03
PHGDH-230ENST00000641927 HSD11B1P28845 292 aa15.24■□□□□ 0.03
PHGDH-230ENST00000641927 HTR5AP47898 357 aa15.24■□□□□ 0.03
PHGDH-230ENST00000641927 WNT4P56705 351 aa15.24■□□□□ 0.03
PHGDH-230ENST00000641927 GALK2Q01415 458 aa15.24■□□□□ 0.03
PHGDH-230ENST00000641927 TBCEQ15813 527 aaPredicted RBP15.24■□□□□ 0.03
PHGDH-230ENST00000641927 TIMM23BQ5SRD1 257 aa15.24■□□□□ 0.03
PHGDH-230ENST00000641927 VASH1Q7L8A9 365 aaPredicted RBP15.24■□□□□ 0.03
PHGDH-230ENST00000641927 ZNF679Q8IYX0 411 aa15.24■□□□□ 0.03
PHGDH-230ENST00000641927 ZNF808Q8N4W9 903 aaPredicted RBP15.24■□□□□ 0.03
PHGDH-230ENST00000641927 RNASE6Q93091 150 aaKnown RBP15.24■□□□□ 0.03
PHGDH-230ENST00000641927 BOD1Q96IK1 185 aa15.24■□□□□ 0.03
PHGDH-230ENST00000641927 MRPS26Q9BYN8 205 aaKnown RBP15.24■□□□□ 0.03
PHGDH-230ENST00000641927 HDHD2Q9H0R4 259 aa15.24■□□□□ 0.03
PHGDH-230ENST00000641927 PNRC2Q9NPJ4 139 aaKnown RBP15.24■□□□□ 0.03
PHGDH-230ENST00000641927 ACOXLQ9NUZ1 547 aa15.24■□□□□ 0.03
PHGDH-230ENST00000641927 B3GNT2Q9NY97 397 aa15.24■□□□□ 0.03
PHGDH-230ENST00000641927 MRM2Q9UI43 246 aaKnown RBP15.24■□□□□ 0.03
PHGDH-230ENST00000641927 SCOCQ9UIL1 159 aa15.24■□□□□ 0.03
PHGDH-230ENST00000641927 LRP12Q9Y561 859 aa15.24■□□□□ 0.03
PHGDH-230ENST00000641927 SULT1C4O75897 302 aa15.23■□□□□ 0.03
PHGDH-230ENST00000641927 RPP14O95059 124 aaKnown RBP15.23■□□□□ 0.03
PHGDH-230ENST00000641927 CLDN14O95500 239 aa15.23■□□□□ 0.03
PHGDH-230ENST00000641927 CLPTM1O96005 669 aa15.23■□□□□ 0.03
PHGDH-230ENST00000641927 LCKP06239 509 aa15.23■□□□□ 0.03
PHGDH-230ENST00000641927 TACSTD2P09758 323 aa15.23■□□□□ 0.03
PHGDH-230ENST00000641927 HSMCR30P0CW71 290 aa15.23■□□□□ 0.03
PHGDH-230ENST00000641927 AGAP20933 346 aa15.23■□□□□ 0.03
PHGDH-230ENST00000641927 CCKARP32238 428 aa15.23■□□□□ 0.03
PHGDH-230ENST00000641927 RIDAP52758 137 aaKnown RBP15.23■□□□□ 0.03
PHGDH-230ENST00000641927 ROM1Q03395 351 aa15.23■□□□□ 0.03
PHGDH-230ENST00000641927 RAB39AQ14964 217 aa15.23■□□□□ 0.03
PHGDH-230ENST00000641927 FBXL19-AS1Q494R0 122 aa15.23■□□□□ 0.03
PHGDH-230ENST00000641927 P2RY8Q86VZ1 359 aa15.23■□□□□ 0.03
PHGDH-230ENST00000641927 SYS1Q8N2H4 156 aa15.23■□□□□ 0.03
PHGDH-230ENST00000641927 OR52N1Q8NH53 320 aa15.23■□□□□ 0.03
PHGDH-230ENST00000641927 OR1F12Q8NHA8 337 aa15.23■□□□□ 0.03
PHGDH-230ENST00000641927 OR5M11Q96RB7 305 aa15.23■□□□□ 0.03
PHGDH-230ENST00000641927 OBP2BQ9NPH6 170 aa15.23■□□□□ 0.03
PHGDH-230ENST00000641927 CACNA1CQ13936 2221 aa15.23■□□□□ 0.03
PHGDH-230ENST00000641927 IQCMA0A1B0GVH7 501 aa15.22■□□□□ 0.03
PHGDH-230ENST00000641927 OPRL1P41146 370 aa15.22■□□□□ 0.03
PHGDH-230ENST00000641927 PPA1Q15181 289 aa15.22■□□□□ 0.03
PHGDH-230ENST00000641927 SPHARQ15513 63 aa15.22■□□□□ 0.03
PHGDH-230ENST00000641927 TAB1Q15750 504 aa15.22■□□□□ 0.03
PHGDH-230ENST00000641927 KCTD20Q7Z5Y7 419 aa15.22■□□□□ 0.03
PHGDH-230ENST00000641927 KLBQ86Z14 1044 aa15.22■□□□□ 0.03
PHGDH-230ENST00000641927 CPEB3Q8NE35 698 aaKnown RBP15.22■□□□□ 0.03
PHGDH-230ENST00000641927 SLC7A6Q92536 515 aa15.22■□□□□ 0.03
PHGDH-230ENST00000641927 ZC3HAV1LQ96H79 300 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms