RNA–Protein interactions for RNA: ENST00000640998.1

SCP2-217, Transcript of sterol carrier protein 2, humanhuman

TSL 5 BASIC

Gene SCP2, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-217ENST00000640998 RER1O15258 196 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 GABARAPO95166 117 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 MMP7P09237 267 aaPredicted RBP13.17□□□□□ -0.3
SCP2-217ENST00000640998 H2BFMP0C1H6 154 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 CELP19835 753 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 GALP22466 123 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 PSMA1P25786 263 aaKnown RBP13.17□□□□□ -0.3
SCP2-217ENST00000640998 GABRA5P31644 462 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 CA7P43166 264 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 CCR9P51686 369 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 GTF2A1P52655 376 aaPredicted RBP13.17□□□□□ -0.3
SCP2-217ENST00000640998 GRB2P62993 217 aaKnown RBP13.17□□□□□ -0.3
SCP2-217ENST00000640998 NFATC3Q12968 1075 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 ECH1Q13011 328 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 P2RY6Q15077 328 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 CDK5R1Q15078 307 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 RAB35Q15286 201 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 TRAM1Q15629 374 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 SLC36A2Q495M3 483 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 LIPKQ5VXJ0 399 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 FOXB2Q5VYV0 432 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 ZNF544Q6NX49 715 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 KLHL24Q6TFL4 600 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.17□□□□□ -0.3
SCP2-217ENST00000640998 GABRG1Q8N1C3 465 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 LRRC18Q8N456 261 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 HTRA1Q92743 480 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 SMIM19Q96E16 107 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 COQ7Q99807 217 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 SH3GL3Q99963 347 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 HDHD2Q9H0R4 259 aa13.17□□□□□ -0.3
SCP2-217ENST00000640998 RSL24D1Q9UHA3 163 aaKnown RBP13.17□□□□□ -0.3
SCP2-217ENST00000640998 SF3B6Q9Y3B4 125 aaKnown RBP13.17□□□□□ -0.3
SCP2-217ENST00000640998 SIRT4Q9Y6E7 314 aaPredicted RBP13.17□□□□□ -0.3
SCP2-217ENST00000640998 PSMD9O00233 223 aa13.16□□□□□ -0.3
SCP2-217ENST00000640998 MSTNO14793 375 aa13.16□□□□□ -0.3
SCP2-217ENST00000640998 GPRIN2O60269 458 aa13.16□□□□□ -0.3
SCP2-217ENST00000640998 SRSF10O75494 262 aaKnown RBP13.16□□□□□ -0.3
SCP2-217ENST00000640998 WNT11O96014 354 aa13.16□□□□□ -0.3
SCP2-217ENST00000640998 IGHV1-2P23083 117 aa13.16□□□□□ -0.3
SCP2-217ENST00000640998 OTX1P32242 354 aaPredicted RBP13.16□□□□□ -0.3
SCP2-217ENST00000640998 MMP16P51512 607 aa13.16□□□□□ -0.3
SCP2-217ENST00000640998 PMPCAQ10713 525 aa13.16□□□□□ -0.3
SCP2-217ENST00000640998 ALKBH1Q13686 389 aaKnown RBP13.16□□□□□ -0.3
SCP2-217ENST00000640998 CCDC92Q53HC0 331 aaPredicted RBP13.16□□□□□ -0.3
SCP2-217ENST00000640998 ELFN2Q5R3F8 820 aa13.16□□□□□ -0.3
SCP2-217ENST00000640998 C1QTNF12Q5T7M4 302 aa13.16□□□□□ -0.3
SCP2-217ENST00000640998 CD200R1LQ6Q8B3 271 aa13.16□□□□□ -0.3
SCP2-217ENST00000640998 C3P1Q6ZMU1 363 aa13.16□□□□□ -0.3
SCP2-217ENST00000640998 SLC16A12Q6ZSM3 486 aa13.16□□□□□ -0.3
SCP2-217ENST00000640998 MS4A15Q8N5U1 240 aa13.16□□□□□ -0.3
SCP2-217ENST00000640998 ZNF433Q8N7K0 673 aaPredicted RBP13.16□□□□□ -0.3
SCP2-217ENST00000640998 ZNF610Q8N9Z0 462 aa13.16□□□□□ -0.3
SCP2-217ENST00000640998 ISOC1Q96CN7 298 aa13.16□□□□□ -0.3
SCP2-217ENST00000640998 CENPMQ9NSP4 180 aa13.16□□□□□ -0.3
SCP2-217ENST00000640998 ZNF224Q9NZL3 707 aa13.16□□□□□ -0.3
SCP2-217ENST00000640998 R4GMQ9 66 aa13.16□□□□□ -0.3
SCP2-217ENST00000640998 USP24Q9UPU5 2620 aa13.16□□□□□ -0.3
SCP2-217ENST00000640998 INTS1Q8N201 2190 aaKnown RBP13.15□□□□□ -0.3
SCP2-217ENST00000640998 ATRXP46100 2492 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 ARPC4-TTLL3A0A0A6YYG9 625 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 A0A0G2JNJ9 132 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 TRBV2A0A0J9YWF9 115 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 ACOD1A6NK06 481 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 SGCEO43556 437 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 NOL3O60936 208 aaKnown RBP13.15□□□□□ -0.3
SCP2-217ENST00000640998 UBL3O95164 117 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 APOC1P02654 83 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 COX5BP10606 129 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 ZNF32P17041 273 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 ARR3P36575 388 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 PSMB10P40306 273 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 GABRA6Q16445 453 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 CTF1Q16619 201 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 ZNF829Q3KNS6 432 aaPredicted RBP13.15□□□□□ -0.3
SCP2-217ENST00000640998 C9orf135Q5VTT2 229 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 OR7E24Q6IFN5 339 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 C17orf78Q8N4C9 275 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 ZFP41Q8N8Y5 198 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 OR2G2Q8NGZ5 317 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 NANOS1Q8WY41 292 aaKnown RBP13.15□□□□□ -0.3
SCP2-217ENST00000640998 PGLYRP3Q96LB9 341 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 KCNJ15Q99712 375 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 ATF6BQ99941 703 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 OR2H1Q9GZK4 316 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 NAA50Q9GZZ1 169 aaKnown RBP13.15□□□□□ -0.3
SCP2-217ENST00000640998 Q9UFV3 132 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 STUB1Q9UNE7 303 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 MEMO1Q9Y316 297 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 GRIP1Q9Y3R0 1128 aa13.15□□□□□ -0.3
SCP2-217ENST00000640998 CACNA1CQ13936 2221 aa13.15□□□□□ -0.31
SCP2-217ENST00000640998 TRDV1A0A1B0GX56 115 aa13.14□□□□□ -0.31
SCP2-217ENST00000640998 OR6C6A6NF89 314 aa13.14□□□□□ -0.31
SCP2-217ENST00000640998 CCDC160A6NGH7 325 aa13.14□□□□□ -0.31
SCP2-217ENST00000640998 TRIM64BA6NI03 449 aa13.14□□□□□ -0.31
SCP2-217ENST00000640998 SYNGR3O43761 229 aa13.14□□□□□ -0.31
SCP2-217ENST00000640998 AIREO43918 545 aa13.14□□□□□ -0.31
SCP2-217ENST00000640998 RPP14O95059 124 aaKnown RBP13.14□□□□□ -0.31
SCP2-217ENST00000640998 HLA-DPB1P04440 258 aa13.14□□□□□ -0.31
SCP2-217ENST00000640998 GADD45AP24522 165 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms