RNA–Protein interactions for RNA: ENST00000637699.1

CLN3-262, Transcript of CLN3, battenin, humanhuman

TSL 2

Gene CLN3, Length 1,228 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-262ENST00000637699 KNG1P01042 644 aa16.24■□□□□ 0.19
CLN3-262ENST00000637699 PPIAL4GP0DN37 164 aa16.24■□□□□ 0.19
CLN3-262ENST00000637699 COX5BP10606 129 aa16.24■□□□□ 0.19
CLN3-262ENST00000637699 IFI30P13284 250 aa16.24■□□□□ 0.19
CLN3-262ENST00000637699 TUBG1P23258 451 aa16.24■□□□□ 0.19
CLN3-262ENST00000637699 LCN6P62502 163 aa16.24■□□□□ 0.19
CLN3-262ENST00000637699 GNB2P62879 340 aa16.24■□□□□ 0.19
CLN3-262ENST00000637699 KLBQ86Z14 1044 aa16.24■□□□□ 0.19
CLN3-262ENST00000637699 POU5F2Q8N7G0 328 aa16.24■□□□□ 0.19
CLN3-262ENST00000637699 OR51A7Q8NH64 312 aa16.24■□□□□ 0.19
CLN3-262ENST00000637699 RAB40AQ8WXH6 277 aa16.24■□□□□ 0.19
CLN3-262ENST00000637699 ZDHHC16Q969W1 377 aa16.24■□□□□ 0.19
CLN3-262ENST00000637699 BPIFA2Q96DR5 249 aa16.24■□□□□ 0.19
CLN3-262ENST00000637699 SIKE1Q9BRV8 207 aa16.24■□□□□ 0.19
CLN3-262ENST00000637699 TMEM165Q9HC07 324 aa16.24■□□□□ 0.19
CLN3-262ENST00000637699 TUBG2Q9NRH3 451 aa16.24■□□□□ 0.19
CLN3-262ENST00000637699 PDP1Q9P0J1 537 aaPredicted RBP16.24■□□□□ 0.19
CLN3-262ENST00000637699 MMP24Q9Y5R2 645 aa16.24■□□□□ 0.19
CLN3-262ENST00000637699 FAM181BA6NEQ2 426 aa16.23■□□□□ 0.19
CLN3-262ENST00000637699 A6NIZ1 184 aa16.23■□□□□ 0.19
CLN3-262ENST00000637699 SGCEO43556 437 aa16.23■□□□□ 0.19
CLN3-262ENST00000637699 CYB5R3P00387 301 aaPredicted RBP16.23■□□□□ 0.19
CLN3-262ENST00000637699 THRBP10828 461 aa16.23■□□□□ 0.19
CLN3-262ENST00000637699 RAP1BP61224 184 aa16.23■□□□□ 0.19
CLN3-262ENST00000637699 RAP1AP62834 184 aa16.23■□□□□ 0.19
CLN3-262ENST00000637699 SCRN3Q0VDG4 424 aa16.23■□□□□ 0.19
CLN3-262ENST00000637699 DEFB112Q30KQ8 113 aa16.23■□□□□ 0.19
CLN3-262ENST00000637699 FAM205BPQ63HN1 556 aa16.23■□□□□ 0.19
CLN3-262ENST00000637699 BRD3OSQ6XYD6 125 aa16.23■□□□□ 0.19
CLN3-262ENST00000637699 C17orf107Q6ZR85 190 aa16.23■□□□□ 0.19
CLN3-262ENST00000637699 LRRC75AQ8NAA5 344 aa16.23■□□□□ 0.19
CLN3-262ENST00000637699 OR10AD1Q8NGE0 317 aa16.23■□□□□ 0.19
CLN3-262ENST00000637699 OR10S1Q8NGN2 331 aa16.23■□□□□ 0.19
CLN3-262ENST00000637699 SLC7A6Q92536 515 aa16.23■□□□□ 0.19
CLN3-262ENST00000637699 PTP4A1Q93096 173 aa16.23■□□□□ 0.19
CLN3-262ENST00000637699 TMEM120AQ9BXJ8 343 aa16.23■□□□□ 0.19
CLN3-262ENST00000637699 WNK1Q9H4A3 2382 aa16.23■□□□□ 0.19
CLN3-262ENST00000637699 DOCK11Q5JSL3 2073 aa16.22■□□□□ 0.19
CLN3-262ENST00000637699 TRAV27A0A087WT01 109 aa16.22■□□□□ 0.19
CLN3-262ENST00000637699 IGHV3-64DA0A0J9YX35 117 aa16.22■□□□□ 0.19
CLN3-262ENST00000637699 GUCY1A3Q02108 690 aa16.22■□□□□ 0.19
CLN3-262ENST00000637699 SF3A3Q12874 501 aaKnown RBP eCLIP16.22■□□□□ 0.19
CLN3-262ENST00000637699 RABL3Q5HYI8 236 aa16.22■□□□□ 0.19
CLN3-262ENST00000637699 OTPQ5XKR4 325 aa16.22■□□□□ 0.19
CLN3-262ENST00000637699 NANOGP8Q6NSW7 305 aa16.22■□□□□ 0.19
CLN3-262ENST00000637699 SLC27A4Q6P1M0 643 aa16.22■□□□□ 0.19
CLN3-262ENST00000637699 VASH1Q7L8A9 365 aaPredicted RBP16.22■□□□□ 0.19
CLN3-262ENST00000637699 WFDC12Q8WWY7 111 aa16.22■□□□□ 0.19
CLN3-262ENST00000637699 PLEKHA8Q96JA3 519 aa16.22■□□□□ 0.19
CLN3-262ENST00000637699 BEX1Q9HBH7 125 aa16.22■□□□□ 0.19
CLN3-262ENST00000637699 MIOXQ9UGB7 285 aa16.22■□□□□ 0.19
CLN3-262ENST00000637699 A0A1B0GUS0 222 aa16.21■□□□□ 0.19
CLN3-262ENST00000637699 IFNL4K9M1U5 179 aa16.21■□□□□ 0.19
CLN3-262ENST00000637699 CRYBA1P05813 215 aa16.21■□□□□ 0.19
CLN3-262ENST00000637699 FUT4P22083 530 aa16.21■□□□□ 0.19
CLN3-262ENST00000637699 RAG2P55895 527 aa16.21■□□□□ 0.19
CLN3-262ENST00000637699 HLXQ14774 488 aaPredicted RBP16.21■□□□□ 0.19
CLN3-262ENST00000637699 OCLNQ16625 522 aa16.21■□□□□ 0.19
CLN3-262ENST00000637699 METTL21CQ5VZV1 264 aa16.21■□□□□ 0.19
CLN3-262ENST00000637699 CGB2Q6NT52 195 aa16.21■□□□□ 0.19
CLN3-262ENST00000637699 OR4F5Q8NH21 305 aa16.21■□□□□ 0.19
CLN3-262ENST00000637699 TSPEARQ8WU66 669 aa16.21■□□□□ 0.19
CLN3-262ENST00000637699 DACT3Q96B18 629 aaPredicted RBP16.21■□□□□ 0.19
CLN3-262ENST00000637699 NEIL1Q96FI4 390 aaPredicted RBP16.21■□□□□ 0.19
CLN3-262ENST00000637699 MEGF10Q96KG7 1140 aa16.21■□□□□ 0.19
CLN3-262ENST00000637699 CCT8L2Q96SF2 557 aa16.21■□□□□ 0.19
CLN3-262ENST00000637699 ECSITQ9BQ95 431 aa16.21■□□□□ 0.19
CLN3-262ENST00000637699 TMEM246Q9BRR3 403 aa16.21■□□□□ 0.19
CLN3-262ENST00000637699 WACQ9BTA9 647 aa16.21■□□□□ 0.19
CLN3-262ENST00000637699 MARCH7Q9H992 704 aa16.21■□□□□ 0.19
CLN3-262ENST00000637699 FGFR1OP2Q9NVK5 253 aa16.21■□□□□ 0.19
CLN3-262ENST00000637699 PTTG3PQ9NZH4 202 aa16.21■□□□□ 0.19
CLN3-262ENST00000637699 KIR2DS1A0A191URI9 304 aa16.2■□□□□ 0.18
CLN3-262ENST00000637699 SRRM5B3KS81 715 aa16.2■□□□□ 0.18
CLN3-262ENST00000637699 H0YL77 283 aa16.2■□□□□ 0.18
CLN3-262ENST00000637699 FBP2O00757 339 aa16.2■□□□□ 0.18
CLN3-262ENST00000637699 RAC2P15153 192 aa16.2■□□□□ 0.18
CLN3-262ENST00000637699 CPT2P23786 658 aa16.2■□□□□ 0.18
CLN3-262ENST00000637699 ST3GAL3Q11203 375 aa16.2■□□□□ 0.18
CLN3-262ENST00000637699 CYLC2Q14093 348 aaPredicted RBP16.2■□□□□ 0.18
CLN3-262ENST00000637699 FAM201AQ5SY85 155 aa16.2■□□□□ 0.18
CLN3-262ENST00000637699 ZNF362Q5T0B9 420 aaPredicted RBP16.2■□□□□ 0.18
CLN3-262ENST00000637699 OR2T2Q6IF00 324 aa16.2■□□□□ 0.18
CLN3-262ENST00000637699 BRICD5Q6PL45 260 aa16.2■□□□□ 0.18
CLN3-262ENST00000637699 FIP1L1Q6UN15 594 aaKnown RBP16.2■□□□□ 0.18
CLN3-262ENST00000637699 OAFQ86UD1 273 aa16.2■□□□□ 0.18
CLN3-262ENST00000637699 MOGAT3Q86VF5 341 aa16.2■□□□□ 0.18
CLN3-262ENST00000637699 CALHM3Q86XJ0 350 aa16.2■□□□□ 0.18
CLN3-262ENST00000637699 TPD52L3Q96J77 140 aa16.2■□□□□ 0.18
CLN3-262ENST00000637699 COG8Q96MW5 612 aa16.2■□□□□ 0.18
CLN3-262ENST00000637699 NUDT16L1Q9BRJ7 211 aaKnown RBP16.2■□□□□ 0.18
CLN3-262ENST00000637699 A4GNTQ9UNA3 340 aa16.2■□□□□ 0.18
CLN3-262ENST00000637699 HTR3EA5X5Y0 456 aa16.19■□□□□ 0.18
CLN3-262ENST00000637699 IFNA14P01570 189 aa16.19■□□□□ 0.18
CLN3-262ENST00000637699 PITPNBP48739 271 aa16.19■□□□□ 0.18
CLN3-262ENST00000637699 SRP9P49458 86 aaKnown RBP16.19■□□□□ 0.18
CLN3-262ENST00000637699 FHL1Q13642 323 aa16.19■□□□□ 0.18
CLN3-262ENST00000637699 CYBRD1Q53TN4 286 aa16.19■□□□□ 0.18
CLN3-262ENST00000637699 OLFML2AQ68BL7 652 aa16.19■□□□□ 0.18
CLN3-262ENST00000637699 NRMQ8IXM6 262 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms