RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 PLA2G2CQ5R387 149 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 C1orf140Q5VVS0 124 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 ARL9Q6T311 187 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 GRINAQ7Z429 371 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 MARCH9Q86YJ5 346 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 UXS1Q8NBZ7 420 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 EDARADDQ8WWZ3 215 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 RFT1Q96AA3 541 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 FOXN4Q96NZ1 517 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 OR2M2Q96R28 347 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 UBL7Q96S82 380 aaPredicted RBP10.33□□□□□ -0.76
CLN6-217ENST00000636964 SMAD5Q99717 465 aaKnown RBP10.33□□□□□ -0.76
CLN6-217ENST00000636964 BIN3Q9NQY0 253 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 EML6Q6ZMW3 1958 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 IGHV1-45A0A0A0MS14 117 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 ZNF729A6NN14 1252 aaPredicted RBP10.33□□□□□ -0.76
CLN6-217ENST00000636964 H3BML4 177 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 RNF13O43567 381 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 ITGA10O75578 1167 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 MED6O75586 246 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 GPANK1O95872 356 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 RNASE12Q5GAN4 147 aaKnown RBP10.33□□□□□ -0.76
CLN6-217ENST00000636964 DCAF12Q5T6F0 453 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 Q6ZTK2 550 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 OR5J2Q8NH18 312 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 NEIL3Q8TAT5 605 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 ELP5Q8TE02 316 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 LIPHQ8WWY8 451 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 OR51B6Q9H340 312 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 ISYNA1Q9NPH2 558 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 CYSLTR2Q9NS75 346 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 AKAP7Q9P0M2 348 aaPredicted RBP10.33□□□□□ -0.76
CLN6-217ENST00000636964 PPP4R1LQ9P1A2 415 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 NXT1Q9UKK6 140 aaKnown RBP10.33□□□□□ -0.76
CLN6-217ENST00000636964 IGHV2-70P01814 119 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 COX6A1P12074 109 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 SDHAP31040 664 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 MESTQ5EB52 335 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 SLC43A2Q8N370 569 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 NARS2Q96I59 477 aaKnown RBP10.33□□□□□ -0.76
CLN6-217ENST00000636964 GPX7Q96SL4 187 aaPredicted RBP10.33□□□□□ -0.76
CLN6-217ENST00000636964 CNN2Q99439 309 aaKnown RBP10.33□□□□□ -0.76
CLN6-217ENST00000636964 NEU1Q99519 415 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 FKRPQ9H9S5 495 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 ZNF160Q9HCG1 818 aa10.33□□□□□ -0.76
CLN6-217ENST00000636964 FAM212BQ9NTI7 297 aaPredicted RBP10.33□□□□□ -0.76
CLN6-217ENST00000636964 EXPH5Q8NEV8 1989 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 TVP23AA6NH52 213 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 A8MVM7 634 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 ZNF593O00488 134 aaPredicted RBP10.32□□□□□ -0.76
CLN6-217ENST00000636964 ZNF883P0CG24 379 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 TCN2P20062 427 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 RPS27P42677 84 aaKnown RBP10.32□□□□□ -0.76
CLN6-217ENST00000636964 TIPARPQ7Z3E1 657 aaKnown RBP10.32□□□□□ -0.76
CLN6-217ENST00000636964 TPRA1Q86W33 373 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 BVESQ8NE79 360 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 OR2Y1Q8NGV0 311 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 FAM122AQ96E09 287 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 ALG12Q9BV10 488 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 JAM3Q9BX67 310 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 ALX4Q9H161 411 aaPredicted RBP10.32□□□□□ -0.76
CLN6-217ENST00000636964 TMEM185BQ9H7F4 350 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 HAO2Q9NYQ3 351 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 PIPOXQ9P0Z9 390 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 SCP2D1Q9UJQ7 156 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 RTTNQ86VV8 2226 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 LOC400499M0QZD8 3231 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 ANKUB1A6NFN9 424 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 G3V3Y1 287 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 MT-ND5P03915 603 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 LAP3P28838 519 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 OTX2P32243 289 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 FOXF1Q12946 379 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 MELKQ14680 651 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 HSD17B12Q53GQ0 312 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 FAM69AQ5T7M9 428 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 NAXDQ8IW45 347 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 SLC35F2Q8IXU6 374 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 OR11G2Q8NGC1 345 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 ZNF417Q8TAU3 575 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 ZNF587Q96SQ5 575 aaPredicted RBP10.32□□□□□ -0.76
CLN6-217ENST00000636964 ZNF436Q9C0F3 470 aaPredicted RBP10.32□□□□□ -0.76
CLN6-217ENST00000636964 SYT4Q9H2B2 425 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 ADAM30Q9UKF2 790 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 FLVCR2Q9UPI3 526 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 CD3GP09693 182 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 JMJD7P0C870 316 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 SMIM6P0DI80 62 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 RAB4AP20338 218 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 PTGDSP41222 190 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 FOLR3P41439 243 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 OR10A3P58181 314 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 INSM1Q01101 510 aaPredicted RBP10.32□□□□□ -0.76
CLN6-217ENST00000636964 FAM27D1Q5T7N8 215 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 ALKAL2Q6UX46 152 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.32□□□□□ -0.76
CLN6-217ENST00000636964 MISPQ8IVT2 679 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 SIAH3Q8IW03 269 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 THAP4Q8WY91 577 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 TMEM234Q8WY98 164 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms