RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 TMEM204Q9BSN7 226 aa13.88□□□□□ -0.19
CLN6-216ENST00000636876 YIPF3Q9GZM5 350 aa13.88□□□□□ -0.19
CLN6-216ENST00000636876 PLEK2Q9NYT0 353 aa13.88□□□□□ -0.19
CLN6-216ENST00000636876 ATPIF1Q9UII2 106 aa13.88□□□□□ -0.19
CLN6-216ENST00000636876 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.88□□□□□ -0.19
CLN6-216ENST00000636876 FBN2P35556 2912 aa13.88□□□□□ -0.19
CLN6-216ENST00000636876 IGHV2OR16-5A0A0B4J2B6 119 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 OR6C6A6NF89 314 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 SNTNA6NMZ2 147 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 ABCD4O14678 606 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 SYNGR3O43761 229 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 CTAG2O75638 210 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 CRYAAP02489 173 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 APLNRP35414 380 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 HTR5AP47898 357 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 MTNR1AP48039 350 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 SPOCK1Q08629 439 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 POU4F2Q12837 409 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 EIF2B1Q14232 305 aaKnown RBP13.87□□□□□ -0.19
CLN6-216ENST00000636876 ELFN2Q5R3F8 820 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 DCXRQ7Z4W1 244 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 THAP5Q7Z6K1 395 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 ZNF454Q8N9F8 522 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 OTOSQ8NHW6 89 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 CNIH3Q8TBE1 160 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 ST7LQ8TDW4 575 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 HDHD2Q9H0R4 259 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 ADGRL4Q9HBW9 690 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 RNF115Q9Y4L5 304 aa13.87□□□□□ -0.19
CLN6-216ENST00000636876 LOC100509620A0A075B734 347 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 SBK2P0C263 348 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 STOMP27105 288 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 SSTR2P30874 369 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 CALCRP30988 508 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 GDI2P50395 445 aaKnown RBP13.86□□□□□ -0.19
CLN6-216ENST00000636876 NUDT6P53370 316 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 TLE4Q04727 773 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 ZNF91Q05481 1191 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 TBC1D28Q2M2D7 210 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 ADAM5Q6NVV9 412 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 TMEM154Q6P9G4 183 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 CDC20BQ86Y33 519 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 SLC35F2Q8IXU6 374 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 PIAS4Q8N2W9 510 aaPredicted RBP13.86□□□□□ -0.19
CLN6-216ENST00000636876 OR51G2Q8NGK0 314 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 OR10S1Q8NGN2 331 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 OR1J2Q8NGS2 313 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 OR1F12Q8NHA8 337 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 SMAP2Q8WU79 429 aaPredicted RBP13.86□□□□□ -0.19
CLN6-216ENST00000636876 FBLIM1Q8WUP2 373 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 RADILQ96JH8 1075 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 POM121L2Q96KW2 1035 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 ZNF184Q99676 751 aaPredicted RBP13.86□□□□□ -0.19
CLN6-216ENST00000636876 COQ7Q99807 217 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 ABHD6Q9BV23 337 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 ANKRD60Q9BZ19 345 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 CDH20Q9HBT6 801 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 PNRC2Q9NPJ4 139 aaKnown RBP13.86□□□□□ -0.19
CLN6-216ENST00000636876 APCP25054 2843 aa13.86□□□□□ -0.19
CLN6-216ENST00000636876 TEP1Q99973 2627 aaKnown RBP13.85□□□□□ -0.19
CLN6-216ENST00000636876 SHISA9B4DS77 424 aa13.85□□□□□ -0.19
CLN6-216ENST00000636876 ATP6V1G2-DDX39BF2Z307 99 aa13.85□□□□□ -0.19
CLN6-216ENST00000636876 APOL3O95236 402 aa13.85□□□□□ -0.19
CLN6-216ENST00000636876 PLAUP00749 431 aa13.85□□□□□ -0.19
CLN6-216ENST00000636876 DBTP11182 482 aaKnown RBP13.85□□□□□ -0.19
CLN6-216ENST00000636876 CCL2P13500 99 aa13.85□□□□□ -0.19
CLN6-216ENST00000636876 ZNF35P13682 527 aa13.85□□□□□ -0.19
CLN6-216ENST00000636876 ALOX5APP20292 161 aa13.85□□□□□ -0.19
CLN6-216ENST00000636876 HCCSP53701 268 aa13.85□□□□□ -0.19
CLN6-216ENST00000636876 ECH1Q13011 328 aa13.85□□□□□ -0.19
CLN6-216ENST00000636876 CDK5R2Q13319 367 aa13.85□□□□□ -0.19
CLN6-216ENST00000636876 SMN1Q16637 294 aaKnown RBP13.85□□□□□ -0.19
CLN6-216ENST00000636876 SLC22A25Q6T423 547 aa13.85□□□□□ -0.19
CLN6-216ENST00000636876 ZNF704Q6ZNC4 412 aaPredicted RBP13.85□□□□□ -0.19
CLN6-216ENST00000636876 PAQR4Q8N4S7 273 aaPredicted RBP13.85□□□□□ -0.19
CLN6-216ENST00000636876 SLAMF6Q96DU3 332 aa13.85□□□□□ -0.19
CLN6-216ENST00000636876 RNFT2Q96EX2 444 aa13.85□□□□□ -0.19
CLN6-216ENST00000636876 AMELYQ99218 206 aa13.85□□□□□ -0.19
CLN6-216ENST00000636876 MNTQ99583 582 aa13.85□□□□□ -0.19
CLN6-216ENST00000636876 ATF6BQ99941 703 aa13.85□□□□□ -0.19
CLN6-216ENST00000636876 DDX28Q9NUL7 540 aaKnown RBP13.85□□□□□ -0.19
CLN6-216ENST00000636876 LAMP5Q9UJQ1 280 aa13.85□□□□□ -0.19
CLN6-216ENST00000636876 RAB26Q9ULW5 256 aa13.85□□□□□ -0.19
CLN6-216ENST00000636876 KLHDC2Q9Y2U9 406 aa13.85□□□□□ -0.19
CLN6-216ENST00000636876 TMEM14AQ9Y6G1 99 aa13.85□□□□□ -0.19
CLN6-216ENST00000636876 A0A1W2PPR1 153 aa13.84□□□□□ -0.19
CLN6-216ENST00000636876 C5orf49A4QMS7 147 aa13.84□□□□□ -0.19
CLN6-216ENST00000636876 ZNF878C9JN71 531 aa13.84□□□□□ -0.19
CLN6-216ENST00000636876 LYNP07948 512 aa13.84□□□□□ -0.19
CLN6-216ENST00000636876 MYF6P23409 242 aa13.84□□□□□ -0.19
CLN6-216ENST00000636876 ATP6V1E1P36543 226 aa13.84□□□□□ -0.19
CLN6-216ENST00000636876 HGFACQ04756 655 aa13.84□□□□□ -0.19
CLN6-216ENST00000636876 KBTBD8Q8NFY9 601 aa13.84□□□□□ -0.19
CLN6-216ENST00000636876 OR4F15Q8NGB8 312 aa13.84□□□□□ -0.19
CLN6-216ENST00000636876 THEM6Q8WUY1 208 aa13.84□□□□□ -0.19
CLN6-216ENST00000636876 RNF133Q8WVZ7 376 aa13.84□□□□□ -0.19
CLN6-216ENST00000636876 SLC7A6Q92536 515 aa13.84□□□□□ -0.19
CLN6-216ENST00000636876 AMBNQ9NP70 447 aa13.84□□□□□ -0.19
CLN6-216ENST00000636876 CENPMQ9NSP4 180 aa13.84□□□□□ -0.19
CLN6-216ENST00000636876 COPS3Q9UNS2 423 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms